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Mutant Lines
15-1715-1

15-1715-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 7055215 [Map]; Strand: w
- AT2G16280.1 - [+] show detail - 3-ketoacyl-CoA synthase 9
  Distance: 2318; Region: intergenic
- AT2G16290.1 - [+] show detail - F-box family protein with a domain of unknown function (DUF295)
  Distance: 3715; Region: intergenic

GGCACANTNG GGCATCAAGT ACGCGNNATA TAAAATGGGG NNNANNTANA 
NCTNCCANCN CNGGGCCGNC NACCACTGCG TGCCCTGTAC CAGTAGACNA 
CAGCNTGCNC GTANAANCTA TCACTTGGNN AAAAANCANC TTCAAANCGT 
GAAAAGCCCN CACTGTATNA CNATGNGAGG GACNNATGGT GANAGACCNT 
CCNTTTTTGA GCTATTGNCT CCCTTTGAAG AANAATGNAT GTTCTATCTT 
GANCCNNAAN NNNTNNNTGN NGANAANACG TNGNCGAAAA GCNTNNTGAA 
TTATNGGGGG ATCACCAAAA AAGGGCCNTN AATNNCGGGT GCCCNANACC 
GAAATTTTAC CCGNCCCANG TAAANACNTG CNTNCAATNT NTNAAATTTT 
ACCCNAATTA ATNAGTTNTA ACCCNAANNC ANATTTNTTT NAAACCNAAN 
AAAAATTNTT TTNGCAATNT NTNAATCGCC TNTNAGGAAT NACN

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 7055115 [Map]; Strand: w
  - AT2G16280.1 - [+] show detail - 3-ketoacyl-CoA synthase 9
    Distance: 2218; Region: intergenic
  - AT2G16290.1 - [+] show detail - F-box family protein with a domain of unknown function (DUF295)
    Distance: 3815; Region: intergenic
Flanking Genome Sequence: 15-1715-1 - 3-prime edge
```
AATGGACCTC TATTAACATC AATGTCAGTG GAAAAATTAA AAAAATGACA 
CGTAGTATGC GAAATGGAAA CCTAACCCGT TAGAGCTATT TGAGGAAAGC 
T
```

AT2G16280.1

Model type: Protein coding
Short Description: 3-ketoacyl-CoA synthase 9
Curator Summary: Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Computational Description: 3-ketoacyl-CoA synthase 9 (KCS9); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, very long-chain fatty acid metabolic process, response to osmotic stress, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 4705 Blast hits to 4688 proteins in 1155 species: Archae - 0; Bacteria - 1679; Metazoa - 0; Fungi - 8; Plants - 2880; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G16290.1

Model type: Protein coding
Short Description: F-box family protein with a domain of unknown function (DUF295)
Computational Description: CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G16300.1); Has 211 Blast hits to 201 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 211; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR