1. Home
  2. Mutant Lines
  3. 15-1758-1

15-1758-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21647 [Map]; Strand: c
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1758-1 - 3-prime edge 
    CCTCCGATGG TTCTCTTCTC TCAGCGTCCA CCAGCGCCTC TCTCACCTCA 
    CCGTCGTTGA TCCCAAGTTC GTCCAAATCC TCCTTCAGAT GCTTGGTTAT 
    ATCCGCACTA AAGGCCCTTG CTCTTTCATC ATCCTCCCAG ACCTCCCTTC 
    CTCCTCCGAT CTCCCCAGTC TCTGCTTTAA AAAATCTCGT GGCTTAATCT 
    CCAGGGTTTC CGAGTCCAAC GAGTCAGAGC GTTTCGTTTT CGACTCTACT 
    CGGCTCTTTG GTTCTGGAGA AGGGGAAAGG GCTCAAGATT GCTCTTGCTC 
    CGTCAATTCC CTCGATTCTG TCGTCATGGC CGAGGAATTT CTTACAAATG 
    TGGATCGTTT CGTGGAGACT ATGGACGTCT TATCGGATGG AGCATTTCTG 
    AGAGGAGAAG AGAGTGATTT GGGGTCCAAT TGGGTAGAAT TAGAGTGGCT 
    CAAAGCCAAA GGCTATTATA GCATGGAAGC CTTCGTTGCA AATAGGTTAG 
    AGGTAAGCAT GAGATTAGCT TGGCTGAACA CAAATAGTGG CAAGAGAAGA 
    GGAATCAAAT TGAAAGAGAA ATTGAATGCT GCTGCTGCGG CTGCCAATTC 
    GTATTGGAGG AAGAAGGCCT GTGTTGATTG GTGGCAGAAT TTGGATGCTG 
    CAACACACAA NAAAATCTGG ACTTGTTTGT TTGGGAAGTC GGCTAATCTG 
    TGGTATGTGT TTTGGAGGGA TGTAGTTTAT ATTACAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21531 [Map]; Strand: c
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1758-1 - 5-prime edge 
    ATCGGAGGAT CGCCGACCTA GGATTGGGGA TAGTATTAGC CATTGAAGAG 
    GAAGACGAGT GGGAGTGGTA CAAAGATATG TGAGATGTTA GCTGAATCGA 
    TAAGTTGATT CTGAGCCATG GATGAAGCAG AGGAGAAGAA TTTGGAAGGG 
    AGATGGCGAT TTTCCATTGT TTCCTCTCTT TTTTTCTTTC TCCAGAGGAA 
    GACGACGAAC GGCTAATAAC TTAAACCAAC TCAATACCCA ACCGGAAATT 
    GGAACCGGTC TTACTTGCTA ACCAATCAAT AGGAGTCTAT TTAAAACGGG 
    CCTGGGCTTG AGCCCATTGT AAATTCTCGA TGCTCTTCTT CTTAGACAGT 
    AGTAAAATTG GGCCTTTTTG TCTCGGCCAA GCCTTTTTTG CGTCGGCGAT 
    ACTCTTTTTC TATTTCTCTT AGCTACAGTG ACCATCTCAT CTCATGTATT 
    TGCCTTGTTG GTGTGAAAGG AATCTCGCAT TAACCAACAT TTGACTTTTA 
    CTTTCTTTTT AAACCTATCA CACACACACA CATGCNTGTG ACATATGTAT 
    CACATCATCT CAAATTTCAA CTTTTTCTTT TTCAGTTTTG ACGAAAAACA 
    AATCAATATT ACACATTATG CATCTGCAAA TTTTAGCTTT CAACTTTNTG 
    CATTTTACAC TACAAATTTC AATATATCTG CTCAACCACT ATGTNTTTNG 
    AAATTTAAAT AGNTTAC

AT4G00060.1

Model type
Protein coding
Short Description
Nucleotidyltransferase family protein
Computational Description
maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR