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15-1767-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15194109 [Map]; Strand: c
      • AT2G36230.1 - [+] show detail - Aldolase-type TIM barrel family protein
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 15-1767-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA AGCTCGATTG CAAACTTGTT CATTTGAGCT 
    TGATCTTAAA TGTTTTTTGA CCTTGACAGA TTCCAGTAAC TTATGCGGGA 
    GGTGTGACGG TAATGGATGA TGTAGAGAGG ATCAAGGACG CAGGAAAGGG 
    ACGTGTAGAT GTAACAGTGG GAAGTGCCTT AGACATTTTC GGGGGAAATC 
    TTCCATACAA AGACGTCGTC GCTTGGCATC ACAAGCAGCA CTCACTCCAT 
    TGATATCGCC ATTTTCACCT TTGCTCATCT TTTTTATTTG CATTACCCCA 
    AACCTTAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15194053 [Map]; Strand: c
      • AT2G36230.1 - [+] show detail - Aldolase-type TIM barrel family protein
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 15-1767-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAGCTT 
    ATCTCTATGT CTAAAGTGAA GTATAACGAC TACATCTAAT CCAATTCCGG 
    TTTCACTAAC ATCACAAGCA TTTTGAATAG AGTGAAGTTC TGTTAATTAT 
    CGTTAAGTCC ATAAGATTAG TTCCGAATCA TATGAAAAAA TAAAGCATCT 
    TGATAAGAAC AAGACATTCT AGATCCTGTA TGATACACAA TCAAGAAACT 
    GCATGTTATT ACTCACCGGA GAGTAGTTGC CAAGCAATGC TACAAGCTCT 
    TCATCGATCC CTAGCCTTTG AGAGAAGAAG TGTTAACACC ACTGATCAGT 
    ACATACTGAC TAAATACTGT ATTTTCAATG CAAAACGAAT TTACTCTAAG 
    ACACTAAAAT CACAGCGTTG AGATATTTAA AGCT

AT2G36230.1

Model type
Protein coding
Short Description
Aldolase-type TIM barrel family protein
Curator Summary
Encodes a BBMII isomerase involved in histidine biosynthesis.
Computational Description
ALBINO AND PALE GREEN 10 (APG10); FUNCTIONS IN: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis (InterPro:IPR006062), Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic (InterPro:IPR011858); Has 5178 Blast hits to 5176 proteins in 1344 species: Archae - 226; Bacteria - 3159; Metazoa - 0; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 1594 (source: NCBI BLink).
Link
InterPro Scan - TAIR