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15-1796-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18308024 [Map]; Strand: c
      • AT2G44300.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 0; Region: exon1 (CDS)
      • AT2G44304.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -734; Region: promoter
    Flanking Genome Sequence: 15-1796-1 - 5-prime edge 
    CAAACAAGTT CTTAATTCAA ACAAGAAGTG TCTTTGTGTG ATCATTCAAG 
    ACAGGAATGA TCCTGATTTG GGTCTCCAGA TCAACGTCTC TCTAGCTCTC 
    GCACTTCCTT CTGTTTGTCA CAGCCGCTGC NTGACNGTCA CTAAATGCCC 
    TGGTTCGTAG CTTTTTCACT GTTAAAAATC TACCTATACA ATGTTCTGTG 
    AAGTAATTAT TTTTTGTAGT TATGAATATA GCACATTAAT TAAGAATGAA 
    AACAGAGTGT ATATGTATGA AAATATTTTA GTAAACAAGT TTTCAAAATT 
    AATTATTGAT TAAATATTAG CACAATCATA ATTGTTTTGG AATGGGTGTT 
    TTTCAGCTTT GCTTCACTTG GATC

AT2G44300.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 754 Blast hits to 750 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 754; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G44304.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR