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15-1803-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 407188 [Map]; Strand: c
      • AT2G01900.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-1803-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC TATTGTTTCC TAAGCAACCC ATGATGCCGC 
    AACCAACGCA TGAAACGCTA GGATAACGGA TGTACGGCCA GAGATCACCT 
    CGGACCCAAA CGGTGATCAA GATTCCGACC ATCTGTTTAC TTATGATACA 
    TCTAAAATCT TGTGAAATAC CATTAATGCC CTTTGATTCC GACAAGTCTT 
    CGTCTCGATG AGGTCTTGCT CTCTTGTTCA AAGCATCTCT TATCAAAGAG 
    TTCCATTTTG TAGAGACTTT GTTGTTATCT GATCCCAAAA CATTCGAAGC 
    TCGTAGAGGC ACAACCTCTT GAAACCTAGA TTTTCATTTA AACTAAAGTT 
    TAGACATAAA ATCCACACGT TATATAACTA TATATATTCA ATTTTTTATT 
    GTAGTGTTTA TCAATTACCC AAGCACGTAT ATGTCGCACG GTGTTTTATG 
    TGTTTCCAGT AGATCCTCCA TGTCAAGCCC ATCGTCCGGT ACGATACCAC 
    CCACGTTCCA TGTGCTTACA AAAACCCTAG AAACAGATAA TTAAAATTAA 
    ATTTAAAACA AAAATTGTCA AAACGTTACA CTATTGTTTT TTTTTTTGAA 
    AAAAAAANCN TTNCNTTNTT TAAAAACATT GNANCTCTTG GAACNCAGNG 
    GAATCAANTG ANGGTTNCCT TAAAATAACA ATTTTGNCNT NTACNNGTNA 
    ANCTCTACNG GTTTATG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 407226 [Map]; Strand: c
      • AT2G01900.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 15-1803-1 - 3-prime edge 
    GTNGTNANAT GNTATCGTAC ANGANGATAT CNTNCTAATN TCTNTANAAT 
    CTNACATGTN ATNGATGNGG ACTGATTTAN GTATAGACTG TTTATANNAA 
    ATGATNACAT GCCGTTAGCA CGTGGNCTTC ATANCTTGAT NANTTAAATA 
    TGNGGNNGAA AATGAACTCT CAGTTATGCA TAGTTTGACT AANATTATNG 
    CATAANGAGN NNGATTGATN ATCAAAAGCT GTACAAGNGG CTTTAGCGTG 
    NNCCTATNAG TTCTTAGCCT CTATCANANT ATTNCAANNC TGTTAGAAAG 
    AGCCGTATAG AAAAGTGCGT NCANNAATGC TGAAAGTNAA ACTTTTTGTA 
    NCGCTTTNAA TNAANATTTT GNNATTGGTN NCTGTCAAAA CTGTATNCAC 
    TGTTTAAAAG TGTTAANTGG TTACCATTCA NAACCANTAG TNAACAAAAG 
    AANATATATN TATNTATATA TNTATATAGA NACNATNANC TNGTGNNGGN 
    TNNNGTCCCC NACCNNCNCN TACCTNNTAC TTCNGTTTNA TNNNNNNGCC 
    GNTGCTGNNT CNACNTNTAT TGNNTCTGNN GNNNNCNAAN NNNCTNTCNT 
    CCNNNNTCAN TNNGCCCNCT TTATTNGNNT GATNNGGCNG GAGNGNAATN 
    NTCNNTTNNN TNATANNCGT TNTNGTNNCN NNGGCCNCTT TTCTATGCTN 
    TTCANTTGTA TNACAACGAN TCNANNNGTN CAGATNTANA NAANATNGAT 
    ANAANATAAA N

AT2G01900.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink).
Link
InterPro Scan - TAIR