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15-1815-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2413390 [Map]; Strand: c
      • AT1G07780.5 - [+] show detail - phosphoribosylanthranilate isomerase 1
        Distance: -713; Region: promoter
      • AT1G07780.1 - [+] show detail - phosphoribosylanthranilate isomerase 1
        Distance: -713; Region: promoter
      • AT1G07780.2 - [+] show detail - phosphoribosylanthranilate isomerase 1
        Distance: -717; Region: promoter
      • AT1G07780.3 - [+] show detail - phosphoribosylanthranilate isomerase 1
        Distance: -715; Region: promoter
      • AT1G07780.4 - [+] show detail - phosphoribosylanthranilate isomerase 1
        Distance: -715; Region: promoter
      • AT1G07790.1 - [+] show detail - Histone superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G07795.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -896; Region: promoter
    Flanking Genome Sequence: 15-1815-1 - 5-prime edge 
    CCTTCAGAGA CGGCGTGTTT AGCGAGTTCA CCGGGGAGGA CGAGTCTCAC 
    AGCCGTCTGG ATCTCGCGAG ATGTAATGGT CGGCTTCTTG TTGTACCTAG 
    CGAGTTTCGA AGATTCCTGA GCTAGCNTTC TCGAATATGT CGTTGATGAA 
    ACTGTTCATA ATCCCCATGG CTTTGCTTGA AATTCCGATA TCTGGATGAA 
    CCTGCTTCAG CACCTTGAAG ATGTAGATC

AT1G07780.1

Model type
Protein coding
Short Description
phosphoribosylanthranilate isomerase 1
Curator Summary
Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.
Computational Description
phosphoribosylanthranilate isomerase 1 (PAI1); CONTAINS InterPro DOMAIN/s: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) (InterPro:IPR001240), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: phosphoribosylanthranilate isomerase 2 (TAIR:AT5G05590.1); Has 5472 Blast hits to 5471 proteins in 2119 species: Archae - 168; Bacteria - 3853; Metazoa - 4; Fungi - 235; Plants - 77; Viruses - 0; Other Eukaryotes - 1135 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07780.2

Model type
Protein coding
Short Description
phosphoribosylanthranilate isomerase 1
Curator Summary
Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.
Computational Description
phosphoribosylanthranilate isomerase 1 (PAI1); CONTAINS InterPro DOMAIN/s: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) (InterPro:IPR001240), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: phosphoribosylanthranilate isomerase 2 (TAIR:AT5G05590.1); Has 5472 Blast hits to 5471 proteins in 2119 species: Archae - 168; Bacteria - 3853; Metazoa - 4; Fungi - 235; Plants - 77; Viruses - 0; Other Eukaryotes - 1135 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07780.3

Model type
Protein coding
Short Description
phosphoribosylanthranilate isomerase 1
Curator Summary
Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.
Computational Description
phosphoribosylanthranilate isomerase 1 (PAI1); CONTAINS InterPro DOMAIN/s: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) (InterPro:IPR001240), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: phosphoribosylanthranilate isomerase 2 (TAIR:AT5G05590.1); Has 5472 Blast hits to 5471 proteins in 2119 species: Archae - 168; Bacteria - 3853; Metazoa - 4; Fungi - 235; Plants - 77; Viruses - 0; Other Eukaryotes - 1135 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07780.4

Model type
Protein coding
Short Description
phosphoribosylanthranilate isomerase 1
Curator Summary
Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.
Computational Description
phosphoribosylanthranilate isomerase 1 (PAI1); CONTAINS InterPro DOMAIN/s: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) (InterPro:IPR001240), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: phosphoribosylanthranilate isomerase 2 (TAIR:AT5G05590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07780.5

Model type
Protein coding
Short Description
phosphoribosylanthranilate isomerase 1
Curator Summary
Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.
Computational Description
phosphoribosylanthranilate isomerase 1 (PAI1); CONTAINS InterPro DOMAIN/s: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) (InterPro:IPR001240), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: phosphoribosylanthranilate isomerase 2 (TAIR:AT5G05590.1).
Link
InterPro Scan - TAIR

AT1G07790.1

Model type
Protein coding
Short Description
Histone superfamily protein
Curator Summary
Encodes a histone 2B (H2B) protein.
Computational Description
HTB1; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 3418 Blast hits to 3391 proteins in 380 species: Archae - 0; Bacteria - 96; Metazoa - 2240; Fungi - 204; Plants - 476; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07795.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28725.1); Has 38 Blast hits to 38 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR