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15-1871-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9938065 [Map]; Strand: c
      • AT1G28335.1 - [+] show detail - low-molecular-weight cysteine-rich 31
        Distance: 332; Region: intergenic
      • AT1G28340.1 - [+] show detail - receptor like protein 4
        Distance: -2110; Region: intergenic
    Flanking Genome Sequence: 15-1871-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TATTAGTTTT GACTTTTGTA AAGAGGGGAA
    TGTGTATCTA TGGGTAAAAG TAAAACTGTA AAAGAGTCAT GTAACGGCTA
    GATCTAGCGG CCCATGTGTT GCTGATATCG CTAGCNTTTT CCCATGGTTT
    TGCACATTTG TGAATGATGA TGATATAGCT TTTTCTGGTG TAAGGAAGAA
    TCTTCATCTT TTCTTTCTTC TCACGTTAAC TCTTTGAATA TGTGGAAACG
    AGATGTTGAT ATAAGGTCCG TTTAGTTGTT TATGCATTAT ACCTCATATC
    CAAACTTTAA TTAGATGAAA GATTAAAAAA AATTACGATA TATAAACGCA
    AATTACCAAA ATTTATTCTT CACTAGAATT TGGTAAGAAT T

AT1G28335.1

Model type
Protein coding
Short Description
low-molecular-weight cysteine-rich 31
Curator Summary
Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.
Computational Description
low-molecular-weight cysteine-rich 31 (LCR31); LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G28340.1

Model type
Protein coding
Short Description
receptor like protein 4
Computational Description
receptor like protein 4 (RLP4); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Leucine-rich repeat domain (TAIR:AT1G25570.1); Has 80698 Blast hits to 16677 proteins in 704 species: Archae - 13; Bacteria - 1525; Metazoa - 2886; Fungi - 292; Plants - 72469; Viruses - 0; Other Eukaryotes - 3513 (source: NCBI BLink).
Link
InterPro Scan - TAIR