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15-1899-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Flowering & Growth::dwarf/small)
vascular leaf (PO:0009025)
  • hyponastic (PATO:0002329)
    (Leaves::hyponastic)
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
    (Seed yield::low yield)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21696680 [Map]; Strand: w
      • AT3G58650.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-1899-1 - 5-prime edge 
    CTGACATCAT CATCCCTTTG CAGCTTCCAA TTAACATCCT TTCAAATTTC 
    ACCGCTAAGC ACTGATTCAC ACAGTCGAAA AGCGCCTTTC TTTCTGTCTT 
    CATTGACGTT GCAGCTCCTC GAGAGCGTTC CATTTCATCA AAGAGGCTGG 
    AGGGTAGTAA TGATTCATTA GTGGTTGTCC CTGAGGCGAA GTCTTGAAAC 
    ATGAGCTGCC CAGAGTTGAG GATCTCGGTT ATGTACTCGA GCTCCCAATC 
    GAGTGTTGCT GATTCTGTTT CATCTAAGGT GTGCTGGGAC TCGTTGGATG 
    AACCCCAAGT GAGCTCTTGA TCTGATGAAC TCTGTTTCAT GCCTGAAAAA 
    ACCAACAACA TTAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21696564 [Map]; Strand: w
      • AT3G58650.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-1899-1 - 3-prime edge 
    GATGTCAGGT GGGATTTTGT TGGAACATAG AGATTTGTTG GCTGAAGAAG 
    TGAACAGAGA AGTAAAAGGG TTGAAGAAGA TGAGAGAGAT GATGATCGAC 
    GAGCTTGTGG ATCATGACAT GAGCCTGTTT TGAAGGGAGA TGGATTGGTT 
    ATGAAAGAGA GATGTTTGAG GAAGGAATAG ACATGGAAGG AGAGATTGTT 
    TCTGCTTTGG TTGATGATTT AGTTAGTGAT ATTTTATCTA CTAGTGTTCT 
    TAAACGGTCG TTGTTGTAAC TTGTATTGTC TTCATAAGAA GCT

AT3G58650.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.1); Has 2350 Blast hits to 1412 proteins in 248 species: Archae - 0; Bacteria - 487; Metazoa - 577; Fungi - 236; Plants - 184; Viruses - 4; Other Eukaryotes - 862 (source: NCBI BLink).
Link
InterPro Scan - TAIR