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15-1899-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage
Phenotype
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Flowering & Growth::dwarf/small)

seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
    (Seed yield::low yield)

vascular leaf (PO:0009025)
  • hyponastic (PATO:0002329)
    (Leaves::hyponastic)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21696680 [Map]; Strand: w
      • AT3G58650.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-1899-1 - 5-prime edge
    CTGACATCAT CATCCCTTTG CAGCTTCCAA TTAACATCCT TTCAAATTTC 
    ACCGCTAAGC ACTGATTCAC ACAGTCGAAA AGCGCCTTTC TTTCTGTCTT
    CATTGACGTT GCAGCTCCTC GAGAGCGTTC CATTTCATCA AAGAGGCTGG
    AGGGTAGTAA TGATTCATTA GTGGTTGTCC CTGAGGCGAA GTCTTGAAAC
    ATGAGCTGCC CAGAGTTGAG GATCTCGGTT ATGTACTCGA GCTCCCAATC
    GAGTGTTGCT GATTCTGTTT CATCTAAGGT GTGCTGGGAC TCGTTGGATG
    AACCCCAAGT GAGCTCTTGA TCTGATGAAC TCTGTTTCAT GCCTGAAAAA
    ACCAACAACA TTAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21696564 [Map]; Strand: w
      • AT3G58650.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-1899-1 - 3-prime edge
    GATGTCAGGT GGGATTTTGT TGGAACATAG AGATTTGTTG GCTGAAGAAG 
    TGAACAGAGA AGTAAAAGGG TTGAAGAAGA TGAGAGAGAT GATGATCGAC
    GAGCTTGTGG ATCATGACAT GAGCCTGTTT TGAAGGGAGA TGGATTGGTT
    ATGAAAGAGA GATGTTTGAG GAAGGAATAG ACATGGAAGG AGAGATTGTT
    TCTGCTTTGG TTGATGATTT AGTTAGTGAT ATTTTATCTA CTAGTGTTCT
    TAAACGGTCG TTGTTGTAAC TTGTATTGTC TTCATAAGAA GCT

AT3G58650.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.1); Has 2350 Blast hits to 1412 proteins in 248 species: Archae - 0; Bacteria - 487; Metazoa - 577; Fungi - 236; Plants - 184; Viruses - 4; Other Eukaryotes - 862 (source: NCBI BLink).
Link
InterPro Scan - TAIR