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15-1950-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6343839 [Map]; Strand: w
      • AT1G18415.1 - [+] show detail - other RNA
        Distance: 0; Region: exon4 (NonCoding)
      • AT1G18420.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-1950-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    CGCTGAGCTC TAATCCTGGG ATCTTAAAGA AGATGAGGAT AGAGGTAAGT 
    GTCAGAGCCA AACCCATCTT CGCCGAGAAT ATCATCTTCC TCGGGTCAGC 
    TGTTCCCATC TCCCATGCCG TAACCAAAAC ATCCTTTAAT TTCTTCACAA 
    CCCCCGTGAT ATTGTCAGAG AAGTAGCTGC AAACAAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6343841 [Map]; Strand: w
      • AT1G18415.1 - [+] show detail - other RNA
        Distance: 0; Region: exon4 (NonCoding)
      • AT1G18420.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-1950-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATGAGC AGGCCACTAT CTCTGGGCAA TTCTTACAGT 
    AGTTGTTATC TTCGAGTTCA GTATAGGTAT ATGCAACAGA CTTTACACAT 
    CAAATTTGAG CATTCTAAAA ACTTTAATAC CTGACATGTG ATCTTCTCTT 
    GTTTTTTGTA TAGGAGCCAC CTTTAGCAAA GGATGTAACC GGGGACTAGG 
    AACATTGTCC GCAGGAGGAC TGGCGCTTGG CATGTCTTGG ATATCGGAGA 
    TGACTGGAAA TTGGGCAGAT GTTTTTAATG CTGCTAGCAT CTTTGTAGTA 
    GGTATATATA CGAAATCATG ATGTGTGGTC TAAACTAAAG CT

AT1G18415.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT1G18420
Link
InterPro Scan - TAIR

AT1G18420.1

Model type
Protein coding
Short Description
Aluminium activated malate transporter family protein
Computational Description
Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: aluminum-activated malate transporter 9 (TAIR:AT3G18440.1); Has 539 Blast hits to 535 proteins in 118 species: Archae - 0; Bacteria - 174; Metazoa - 1; Fungi - 11; Plants - 341; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR