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15-1965-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17167719 [Map]; Strand: w
      • AT1G45249.1 - [+] show detail - abscisic acid responsive elements-binding factor 2
        Distance: 0; Region: intron1 (5UTR)
      • AT1G45249.3 - [+] show detail - abscisic acid responsive elements-binding factor 2
        Distance: 0; Region: intron1 (5UTR)
      • AT1G45249.2 - [+] show detail - abscisic acid responsive elements-binding factor 2
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 15-1965-1 - 5-prime edge
    AGTATTAGGC ACAATTAGTA ATTTTATCCA AAAATTAAGT GTGGACATAA 
    ATGGAAAGAA TTAAAAGAAG ATGAACAAAA ACCACAGTTT CTTCTATACA
    CACAAAGAGA AGAAAAATCT ATTACCTTTT TGCTAAATTC GTGTGCTTTG
    TAATTTTCCC AAAAAATTTC AAAATGTTTG GTTCTTCGTT TGGGTGATTA
    GGTAGTTTGT CTGGTGAGCC AAGTGTCTCT CTGTCTCCTA ACAATCTTGA
    ATAAATACTA CTTTTGCTAA TTATTTTAAT AAAATGGTAT ATACTCTGTA
    TCTTTGTATT TTGCGTCACT TTCCCTCTTC GTTTTTATTT TACTAATTTC
    ACTTACTAGT TGTTTTCCTT TTCAGGATTT ATGTTGTTTT AATTTAGGCC
    TTGAATGTTT TGTAGATTTT GTAAGAGTTT TTGGTTTTTG TTTTCCAAAA
    ACTTATTTTC ATACCAATCA AGATTTTAAA ATTTTGGTTT CCCTACAATT
    TANAAAAACT ATTTTCTTGT AGTTTTCCAT TCATGATTTT AGTTTTTTAG
    NTCTCCTAAA ATTTAGGAAA TCTAGTTTTA CTCAATCAAC ANTATTTTTN
    TNAAAAACCA AAAACCAAAT NTTTGGGGTT TTGAAACCAA AATTNANTAN
    TAAAAATCTN GAAACTNAAA TNNANATCTT TAACTAAAAT NTAAATTCAA
    A

AT1G45249.1

Model type
Protein coding
Short Description
abscisic acid responsive elements-binding factor 2
Curator Summary
Leucine zipper transcription factor that binds to the abscisic acid (ABA)
Computational Description
abscisic acid responsive elements-binding factor 2 (ABF2); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: hydathode, leaf vascular system, whole plant, root, cultured cell; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: abscisic acid responsive elements-binding factor 3 (TAIR:AT4G34000.2); Has 2346 Blast hits to 2224 proteins in 173 species: Archae - 0; Bacteria - 11; Metazoa - 428; Fungi - 29; Plants - 1792; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G45249.2

Model type
Protein coding
Short Description
abscisic acid responsive elements-binding factor 2
Curator Summary
Leucine zipper transcription factor that binds to the abscisic acid (ABA)
Computational Description
abscisic acid responsive elements-binding factor 2 (ABF2); FUNCTIONS IN: protein binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: hydathode, leaf vascular system, whole plant, root, cultured cell; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827); BEST Arabidopsis thaliana protein match is: abscisic acid responsive element-binding factor 1 (TAIR:AT1G49720.2); Has 532 Blast hits to 413 proteins in 48 species: Archae - 0; Bacteria - 11; Metazoa - 7; Fungi - 4; Plants - 509; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G45249.3

Model type
Protein coding
Short Description
abscisic acid responsive elements-binding factor 2
Curator Summary
Leucine zipper transcription factor that binds to the abscisic acid (ABA)
Computational Description
abscisic acid responsive elements-binding factor 2 (ABF2); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: abscisic acid responsive elements-binding factor 3 (TAIR:AT4G34000.2).
Link
InterPro Scan - TAIR