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15-1969-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 293797 [Map]; Strand: w
      • AT3G01820.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 15-1969-1 - 5-prime edge 
    GNGATAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TATATATAAT AGACTCATTA CAAGCTTTAG 
    TGGTATCATC CTCATCACGT TTGATCTCTC GCAAAACTTT GAATTACAGA 
    AAAAGAAAAC AAAAAAAAAN GTGGCNTNTT AGGGGTTAAN AANACCCNTA 
    AAAGGAGAGA NAANGATCAC CANCCNGGGC CGTNNACCNC NCGNGGCCCT 
    ANATAATAAN ANAGTTNGCT TCNGGGAAGN CGTCAAATNC NCCNGCTTCA 
    NANGTAANGC NGCCANCANG CCCNGCCNNG NGTCNGCNGA NGGGGCCCCG 
    CCANCNNGAA NGTCTANCNG TTCCCTCGGC TTCCTATAGN ATNCTTCCCC 
    CNGATGGAAT CNCCNCCNCA NNATTTTNNG CNGAANCCNC CTNGNAANCT 
    ANATTTTTAN CAANGACNTG GATCAAAAAN GTNCCTCCNG GGCGTANACN 
    CCGACNCTNT CCNTCCGAGC NTGGATGGCA NCAGGGGAGG GTANCATANA 
    NCCGNGGAAC NCCGGNTGNG GCAAANCNGN NNCATTCCGG TTAACCANAN 
    GGTCTTNAAA GCNTTNGNNA TGGACNACAN GGNNAATCNG NNCGATNGGA 
    NCAANAGNNN CCGGCAAAAC ATTCANAACA NNTNGANGAN TNNGNNAAAC 
    NNANTNCANT GGNGGATNNN TATNAAAGGN NNNNNGNAAN CNAGCTNCCN 
    NNATNAAAAA AAAANGANNG GGGNNNGNAN NNCNNTNNGN ANGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 293805 [Map]; Strand: w
      • AT3G01820.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 15-1969-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGATTATATA TACAACAAAG ATTTTCCATC TATGAAAAGT AGTTCCTATA 
    TCACAATAAG ACGTGCATGA TTTGCTTCAC TTGCAACAAT CTAGCGCACG 
    TCTCTGCAAT ACATGTCAAT CTGCGTGTTA TTCAAATTGT ATATATGTCA 
    AGCTCAAACT TTCAGTACTG TTACTACTGT CTTCATTCTA TACATGGCGG 
    CAACACCAAA AGTATCATAA TCTCCTTGTG AACCTGACAC AAGCCTAACT 
    GGTTCCATCG CAGATGATAC TTTGGTTCTG ATCTTCTTCT TGAAGGTTTC 
    CCCTGACTGG TTGGTATACA TTTTGAATGA TGCATAAGTG TTGATAAACT 
    ACAAGTACAC AAAATATGAA ACAAAATCTA TGCACATCAA TAAAAATTCA 
    CTCTGAAAAC GCAGAAAATT CTTAAGTGTT TATTATTGTT TTCAATATAT 
    GAGAGGAGGA GCTCCCCTAC TATTTTTATT TTCTCAACCA ATGAGAGAGC 
    TCCACTTCAT ACCCCACTTT TACCAATCGC TCGATTTTAC GGCCACTCTC 
    ACCCATGTCG AGTTGAGCGC GTGTCTACGA TTTCTAAAGG GGAATCCACA 
    AAAATCATTC CTTTTTTGAT CCACGCACCT CATTCTCAAA AACCCATCGC 
    GTGTCTTATT TCTTTTGGGT TTTCTTCTCT AAACCAAAAG TAAACCGAAC 
    CGAGATCAAT TTGAATTTTC AAAACCAATG TAACCAATCG CTG

AT3G01820.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine kinase (TAIR:AT2G37250.1); Has 9469 Blast hits to 9393 proteins in 2915 species: Archae - 95; Bacteria - 5951; Metazoa - 891; Fungi - 419; Plants - 430; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink).
Link
InterPro Scan - TAIR