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Mutant Lines
15-1973-1

15-1973-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 6039149 [Map]; Strand: w
- AT1G17560.1 - [+] show detail - Ribosomal protein L14p/L23e family protein
  Distance: -457; Region: promoter
- AT1G17580.1 - [+] show detail - myosin 1
  Distance: -154; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCG TCATGCCGTC CATTTTGAAG CTAGCACTGG 
GACCCACTAG TAATCTGTAT CAGACAAGAG ACAAAATAAA ACCCCCCAAA 
TGGCTTCTCC AAGCGGAGCT CCAACGAAAC GCCTTTTTTT TTTAAACTCT 
CCNCCGGGAT AANANANANA NATTNCCAAA TTCTCNCCGG AAAAAAAAAA 
NGGGCTTTCC TTTCCTGAAA TTTCCGGGNA AAAGTCATNG ACTTTATNAC 
TCTNAAGTCT NTCCACAAGT NGATNGATTC TGCTCTAATC TCCTNATNNG 
GGGTCTTTCC CCTNTNGCTN TTNAAANGGN AAATTNAAAT NTNTCTNTAT 
NCCATTTTAT GTTTNTAAAA AATATCTNGG NCTNTTNGCT NAACNGTTTA 
TTNNAAAACN GAAAACCTNG CTNGTTNGTT NCGTNAANGT NGTNGTNGCG 
TTNGCTNGCT TNACCCCTTT TNGTTNCCTG TNNGGANACC CTAATTCTNG 
ATCTANGGNG GTTTTTACTT NTNAANGGTT TNGGTTTNAC TNTGTNTAGC 
TAAGTTNTAN AAGCT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 6018298 [Map]; Strand: c
  - AT1G17500.1 - [+] show detail - ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase famil...
    Distance: -459; Region: promoter
Flanking Genome Sequence: 15-1973-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TCGGTGAATT GTTCCACTTG ATCAACCTCT TCTCAGCCGT TTAACTTCTT 
GATTTAGGAA TTTTTGGACT ATCTTTTGCT GCTGGTTACT GCGTTTTCCT 
TCTTTTGNTT CTTCACATTT TGCTCGCAAT ATTCATTGGA TCAATCGGAA 
TT
```

AT1G17500.1

Model type: Protein coding
Short Description: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Computational Description: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G72700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G17560.1

Model type: Protein coding
Short Description: Ribosomal protein L14p/L23e family protein
Curator Summary: Mutant shows abnormal ovule development
Computational Description: HUELLENLOS (HLL); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14, bacterial-type (InterPro:IPR005745), Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT5G46160.2); Has 9401 Blast hits to 9401 proteins in 3194 species: Archae - 306; Bacteria - 5487; Metazoa - 280; Fungi - 278; Plants - 760; Viruses - 0; Other Eukaryotes - 2290 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G17580.1

Model type: Protein coding
Short Description: myosin 1
Curator Summary: Encodes a member of the type XI myosin protein family involved in organelle trafficking and overall plant development.
Computational Description: myosin 1 (MYA1); FUNCTIONS IN: motor activity; INVOLVED IN: in 8 processes; LOCATED IN: myosin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.1); Has 18995 Blast hits to 13821 proteins in 1312 species: Archae - 114; Bacteria - 980; Metazoa - 11844; Fungi - 1348; Plants - 1046; Viruses - 13; Other Eukaryotes - 3650 (source: NCBI BLink).
Link: InterPro Scan - TAIR