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15-2002-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2264337 [Map]; Strand: w
      • AT5G07215.1 - [+] show detail - transposable element gene
        Distance: -1375; Region: intergenic
      • AT5G07220.1 - [+] show detail - BCL-2-associated athanogene 3
        Distance: 919; Region: intergenic
    Flanking Genome Sequence: 15-2002-1 - 3-prime edge
    CATGCCAATC ATAACATTGA TTATGTTTCT TGTGGAATTG GTAACTTCTG 
    GTG

AT5G07215.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 6.9e-34 P-value blast match to GB:NP_038605 L1 repeat, Tf subfamily, member 30 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR

AT5G07220.1

Model type
Protein coding
Short Description
BCL-2-associated athanogene 3
Curator Summary
A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.
Computational Description
BCL-2-associated athanogene 3 (BAG3); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 2 (TAIR:AT5G62100.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR