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Mutant Lines
15-2025-1

15-2025-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 9968951 [Map]; Strand: c
  - AT1G28390.2 - [+] show detail - Protein kinase superfamily protein
    Distance: -650; Region: promoter
  - AT1G28390.1 - [+] show detail - Protein kinase superfamily protein
    Distance: -665; Region: promoter
Flanking Genome Sequence: 15-2025-1 - 3-prime edge
```
TGTGTAGAAT CTAGAGCCTC TTTAGGGATG AGACCAAGCG GGAACAAGGA 
TGATAATAGG TAATTCAAAG ATTTTTATTC GTGTATTGTT ATAATCCAAT 
ATAAAATCTG TGCACACATG TACTCCCACA AAAAGTGGAT C
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 8990430 [Map]; Strand: c
- AT1G25560.1 - [+] show detail - AP2/B3 transcription factor family protein
  Distance: -7389; Region: intergenic
- AT1G25570.1 - [+] show detail - Di-glucose binding protein with Leucine-rich repeat domain
  Distance: 1396; Region: intergenic

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCGTT TACGTCTATA ATGCTGATTT GGACACTAAA 
GCCTATCCCT AATAATCTTA TTTCCATATA TGCATTTACC TATGTTTCAG 
TTTACCTGTG TAAAAAAACC ATGCACGTCG NCCATGACTA TCTTCACACT 
CCTTAAAATA CATTAATCAC TCTCATGCAT GGATTATGTT ATCAATTTAT 
GATATATCTA TCGGAGCTCC AAGTAGTCAT TCGAATTTCG AAAGAAGCTC 
AAATATATTG GGTATTCAAT TCTTCCATGC TATATATATA TATTTGAATA 
ACTCAAAACT TATATATGAA ATTTCGTCTT TCTATAAGGT CATAATTAAT 
GACCGGATAT GAGTATGCAT GTCTTAATTA CTACAACCAA CTTGATATGG 
TCTTCGGTTT TGAAATCTTT CACGTGATTT GAACTTTTTA TACGTTAAAT 
GACATTATAC TAAAATTTAT TCTCGTGTNG ATTTTCAAAT GGATATAAAT 
CTAATCTTAA TTGAATT

AT1G25560.1

Model type: Protein coding
Short Description: AP2/B3 transcription factor family protein
Curator Summary: Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.
Computational Description: TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25570.1

Model type: Protein coding
Short Description: Di-glucose binding protein with Leucine-rich repeat domain
Computational Description: Di-glucose binding protein with Leucine-rich repeat domain; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 4 (TAIR:AT1G28340.1); Has 39900 Blast hits to 11672 proteins in 418 species: Archae - 2; Bacteria - 388; Metazoa - 87; Fungi - 9; Plants - 38059; Viruses - 0; Other Eukaryotes - 1355 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G28390.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G51990.1); Has 101909 Blast hits to 100959 proteins in 2971 species: Archae - 79; Bacteria - 11366; Metazoa - 36596; Fungi - 8457; Plants - 30559; Viruses - 339; Other Eukaryotes - 14513 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G28390.2

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G51990.1).
Link: InterPro Scan - TAIR