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15-2043-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 15674891 [Map]; Strand: w
      • AT3G43825.1 - [+] show detail - transposable element gene
        Distance: 187; Region: intergenic
      • AT3G43826.1 - [+] show detail - pseudogene, hypothetical protein
        Distance: 502; Region: intergenic
    Flanking Genome Sequence: 15-2043-1 - 5-prime edge 
    ATCGGTAAAG TCANNGGAAT CAACGGTGGA GGAGNTGACA NGATCNATGA 
    CTCGTCNCCA ANNTNTGTGC CNTTACTTNC TNTACTACTG NNACGTNNGN 
    GCCTAAAGNT NNGGTGNNTG AGTCAAATCT TTCAGGATCN CCNGNCCGGG 
    CCGNTAGACC ACCCAGTGCC CTAGAAATCT ATAGACTTTC TCGTTTCTCA 
    AGACTAACGC TTTGAATAGT TCCAGGCGGA TGGAACAAAC AAAACTATTT 
    ATGGGTTGAG ACTTGAGATG TTGTTTACCA TTTATGGGTT GACATTGTAA 
    ATGGTTGTGC TACACAAGGA AAACGACTAA ACGAATCTTG ATACAAAAAA 
    AAAAANAAAA TTTTAANNAA AAAAAATTTT TTTTGNNNNN TANNTNAAAA 
    ATTTNTNTTN AANNTTTAAA CCNNANTTCN AAATAAAANT AAAAAAGGAA 
    CCTTTNGGNC TTNAANNAGG NCCCANTTNC TNTTTNCCCN CCNTTTNGAA 
    AANNNAANTA ACTNNNCCCN NGGGGGGNNT TNNGGGCNNN NGGTGGCCTN 
    TTTTTTTCNA NCNTTNNAAN TTNNNNNNAA ANCNCCNTTA NNNNTANTNC 
    GCGGNTNAAA GNGNNNTTNT NNGNNNNNCT ANTNNGGGAN ANCCCCNCCT 
    GNNATANNNA NCCNGTTNCN TTTTNNGGNN ANGANANTNG NANAANNNCN 
    GNNANAANNT TTCCN

AT3G43825.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 8.3e-106 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR

AT3G43826.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR