1. Home
  2. Mutant Lines
  3. 15-2049-1

15-2049-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8778189 [Map]; Strand: w
      • AT1G24822.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -307; Region: promoter
      • AT1G24880.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
        Distance: 0; Region: intron3 (CDS)
      • AT1G24851.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -91; Region: promoter
    2. Chromosome: 1; Position: 8800717 [Map]; Strand: w
      • AT1G25054.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
        Distance: 0; Region: intron3 (CDS)
      • AT1G25054.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
        Distance: 0; Region: intron2 (5UTR)
      • AT1G24996.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -307; Region: promoter
      • AT1G25025.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -91; Region: promoter
    3. Chromosome: 1; Position: 8815095 [Map]; Strand: w
      • AT1G25097.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -307; Region: promoter
      • AT1G25112.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -91; Region: promoter
    4. Chromosome: 1; Position: 8829473 [Map]; Strand: w
      • AT1G25180.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -91; Region: promoter
    Flanking Genome Sequence: 15-2049-1 - 3-prime edge
    CCTCCAGGAT TTTGACGAGC CTACCCTCTT GACTTAACAT TCTGCTTAGG 
    CCTTTGACTT GGATTTGGGC CTTGGGCCAA GCAAGCCCAA ATCTTACCCC
    TAACAGTAGC TGAAATGGAT CACAACGTAC CTAATTCCGA TTTCTATATC
    TAGTGTACGT ATTGATATTC TTTAGCAATA GTTTTGGAAA ATATAATCTG
    AGTTTAGTGT ACTCGTTGGC TTTATTACTT TTGAATTTTA ATAATAGTCT
    ATTTTAACCA TAAGTACTAG CATATACTAA ATAACTTGAT CTACACAATA
    AAATACAGAA GATTGATTCT CAAACTATTT CTCTCTCTCT CTCTCACAGA
    GAATCTCCAA TGGCGGCTCC CGTAGTGGTC GCTCCTGCGA TAAATCTTCA
    GCATATGGAC CTACCTGAAG GAAATGAAGG TAATAAAAAA CGATTATATT
    CTCAGAAGCA AGATATAGGG GTAGCGAATT TGGGGTAATA AAGAAATTGA
    AATTGAAAGT ATCAAGAAAC ATTGGTGAGT TTGGGAATTG GAGGAATGTA
    TTTAAAATTA GAGTAGATC
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8800833 [Map]; Strand: w
      • AT1G25054.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
        Distance: 0; Region: intron3 (CDS)
      • AT1G25054.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
        Distance: 0; Region: intron2 (5UTR)
      • AT1G24996.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -423; Region: promoter
      • AT1G25025.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    2. Chromosome: 1; Position: 8815211 [Map]; Strand: w
      • AT1G25097.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -423; Region: promoter
      • AT1G25112.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    3. Chromosome: 1; Position: 8829589 [Map]; Strand: w
      • AT1G25180.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2049-1 - 5-prime edge
    CCTGGAGGAG TGTCCTACAC GCAGAAGGCT ATAAATACGG AATAGCATGT 
    CTTGTCAAAG GGGGATTCCG CCGGACACGC AGAGACACAG AGCAGCTCGT
    CAGCTCACCC GTCCGAAGTA TCCCGCCAGC CGGTCCGTCT CAAGCAGCTC
    GTCAGCTCAC CCGTCTCAAG CAGCTCGTCA GCTCTCCCNT CCGAAGTATC
    CCGCCAGCCG GTCCGTCTCA AACAGCTCGT CAGCTCACCC GTCTCAAGCA
    GATCGTCAGC TCACCCGTCC GAAGTATCCC GCCAGCCGGT TCGTCTCAAG
    CAGCTCGTCA GCTCACCCGT CTCAAGCAGC TCGTCAGCTC ACCCGTCTCA
    AGCAGCTCGT CAGCTCACCC GTATCAAGCA GCTCGTCAGC TCACCCGTCC
    AAAGTACCTC GTCTGCCCAT CCATCTTGAG TAACTCGTTT ACTCGTCCGT
    CCGAAGTGTC TCGCCGACCT GCCCGCCCAA AATAACTAAC CTACTCGCAC
    GTCTCGA

AT1G24822.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25097.1); Has 12 Blast hits to 12 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24851.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25025.1); Has 6812 Blast hits to 2172 proteins in 306 species: Archae - 0; Bacteria - 350; Metazoa - 1330; Fungi - 775; Plants - 255; Viruses - 55; Other Eukaryotes - 4047 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24880.1

Model type
Protein coding
Short Description
UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description
UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G25054.1); Has 5321 Blast hits to 5321 proteins in 1417 species: Archae - 0; Bacteria - 2995; Metazoa - 1; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24996.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24822.1); Has 11 Blast hits to 11 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25025.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25112.1); Has 8171 Blast hits to 2608 proteins in 364 species: Archae - 0; Bacteria - 499; Metazoa - 1710; Fungi - 974; Plants - 287; Viruses - 83; Other Eukaryotes - 4618 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25054.1

Model type
Protein coding
Short Description
UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description
UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 5320 Blast hits to 5320 proteins in 1417 species: Archae - 0; Bacteria - 2992; Metazoa - 1; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25054.2

Model type
Protein coding
Short Description
UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description
UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 5321 Blast hits to 5321 proteins in 1417 species: Archae - 0; Bacteria - 2995; Metazoa - 1; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25097.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24822.1); Has 12 Blast hits to 12 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25112.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25025.1); Has 8171 Blast hits to 2608 proteins in 364 species: Archae - 0; Bacteria - 499; Metazoa - 1710; Fungi - 974; Plants - 287; Viruses - 83; Other Eukaryotes - 4618 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25180.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25025.1); Has 8171 Blast hits to 2608 proteins in 364 species: Archae - 0; Bacteria - 499; Metazoa - 1710; Fungi - 974; Plants - 287; Viruses - 83; Other Eukaryotes - 4618 (source: NCBI BLink).
Link
InterPro Scan - TAIR