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Mutant Lines
15-2052-1

15-2052-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 3066715 [Map]; Strand: w
  - AT1G09500.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G09500.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
    Distance: -38; Region: promoter
  - AT1G09500.3 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
    Distance: -38; Region: promoter
Flanking Genome Sequence: 15-2052-1 - 5-prime edge
```
GACGTTATGT TAATGTAGTG TCGTCACACG TGACTTAAAA GAGACGAGTC 
TGCGTGTCAA ACTAAAAATG TATGCAACTA TAAAAATGGG ATTTGATTAT 
CTTTTTAGTA CCGAAGCCTA CCAACCACAT GCACACTAAT TCTACTCGCC 
AAATAAAGTG AAAAGAGATG GCTGATGGAG GAAAGGTGGT CTGCGTAACC 
GGAGCTTCCG GTTACATAGC GTCTTGGATC GTCAAGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 3066644 [Map]; Strand: w
- AT1G09500.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: -55; Region: promoter
- AT1G09500.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: -109; Region: promoter
- AT1G09500.3 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: -109; Region: promoter

ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
GTCCATTATT TCTGCCTTGC AACATTTGTT GTTTGATTCC TTGCCTTCTT 
TTGCTTTTCT TTGGTCAAAT GGTTTTTGTT TCTTTCCTTA CGAAAACAAA 
ACCTCTCACA CACATACAAT TATGGGAAAT ATTCTATCCC ATTAAATATC 
TATACACCAT GCTCTTATCC ATTTTTGTAT CTTAGTAATT GTNTTTAGTA 
TAAATAATTT AAAAATTAGT ACTCAAATTA ATGAGAATAA ATAAATAAAT 
ATAACAAATT TTGATAATTT CACAAACAAA AAAAAGTAGA ACTCATAACC 
AATTTTATAG TCTAGATATA TTCGTCAAGT ATTTGTTAGG ACGAGGAATC 
CACATTGAAC TAAAACACCT AAAATAGATG ACAACAATAA TTTTTCATTT 
TGGAAAACTA AATTATTGGA CAACTACTGG TTAAGTGTTG CCTGTCCCTT 
TAGTGATATT NTATGAGCTT CTAAGGATAA GGGTGGATTA CGTGGTTCAA 
GTCTTGATCA TTGAATCCAA TTACCATNGG ATTACTGGAG TTTGAATT

AT1G09500.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary: similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity, cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09510.1); Has 9627 Blast hits to 9614 proteins in 1666 species: Archae - 148; Bacteria - 3563; Metazoa - 355; Fungi - 930; Plants - 2402; Viruses - 50; Other Eukaryotes - 2179 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G09500.2

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary: similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity, cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09510.1); Has 5984 Blast hits to 5972 proteins in 1034 species: Archae - 45; Bacteria - 1406; Metazoa - 103; Fungi - 845; Plants - 2285; Viruses - 7; Other Eukaryotes - 1293 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G09500.3

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary: similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity, cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR