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Mutant Lines
15-2054-1

15-2054-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 9590532 [Map]; Strand: w
- AT1G27580.1 - [+] show detail - Protein of unknown function (DUF295)
  Distance: 0; Region: exon2 (CDS)

CTCACGGGTG GCATAGACGT AAAGATTGTA ACCTTTCAGT ACCATATCGT 
TTAAACCTCG TAACTCCCTC TGAACCTCGA GCTCTGTTGG AATCTCGCGG 
TAATGATCAT CCCCTGTCCT GCAAAACCCT AGAAATGGGT ACATTTCAAA 
CTGCCACACA ACAACGTAGT TTCCATTCTT GTCGTCAACC CACAAACGAC 
CTCTCAGATC TTCGGCAGCA TGAGGAAATT CATCACGAAA TGGATC

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 9567091 [Map]; Strand: w
  - AT1G27540.1 - [+] show detail - Protein of unknown function (DUF295)
    Distance: 0; Region: exon1 (CDS)
  - AT1G27540.2 - [+] show detail - Protein of unknown function (DUF295)
    Distance: 0; Region: exon2 (CDS)
2. Chromosome: 1; Position: 9590416 [Map]; Strand: w
  - AT1G27580.1 - [+] show detail - Protein of unknown function (DUF295)
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 15-2054-1 - 3-prime edge
```
CCCGTGAGTT CATTCGACAC TTAGATTTGT CTGGACAAGA TGAAGATGGT 
TTCAAGGATG TATCCGAGAA ACATAGGCTT CCAATGTGGA TGCCAAGTAT 
GACAATGAAG GAACGTGAAC GTATGAAGCA AAAGAGGTCT ATCCCATCTA 
ACAAAGGCAT TGCTGTTACA AGAGCAGGTC AAGTTTTGGT TGTCTTTACG 
TACGATTTAG GTACCTCTGA AAGTCACAGG ATGTTCCATC TGTACAAGAG 
GGATC
```

AT1G27540.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF295)
Computational Description: Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G27580.1); Has 275 Blast hits to 268 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 275; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G27540.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF295)
Computational Description: Protein of unknown function (DUF295); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G27580.1); Has 278 Blast hits to 271 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 278; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G27580.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF295)
Computational Description: Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G27540.1); Has 231 Blast hits to 231 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 231; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR