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15-2095-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21675 [Map]; Strand: w
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2095-1 - 5-prime edge 
    GTTCTCTTCT CTCAGCGTCC ACCAGCGCCT CTCTCACCTC ACCGTCGTTG 
    ATCCCAAGTT CGTCCAAATC CTCCTTCAGA TGCTTGGTTA TATCCGCACT 
    AAAGGCCCTT GCTCTTTCAT CATCCTCCCA GACCTCCCTT CCTCCTCCGA 
    TCTCCCCAGT CTCTGCTTTA AAAAATCTCG TGGCTTAATC TCCAGGGTTT 
    CCGAGTCCAA CGAGTCAGAG CGTTTCGTTT TCGACTCTAC TCGGCTCTTT 
    GGTTCTGGAG AAGGGGAAAG GGCTCAAGAT TGCTCTTGCT CCGTCAATTC 
    CCTCGATTCT GTCGTCATGG CCGAGGAATT TCTTACAAAT GTGGATCGTT 
    TCGTGGAGAC TATGGACGTC TTATCGGATG GAGCATTTCT GAGAGGAGAA 
    GAGAGTGATT TGGGGTCCAA TTGGGTAGAA TTAGAGTGGC TCAAAGCCAA 
    AGGCTATTAT AGCATGGAAG CCTTCGTTGC AAATAGGTTA GAGGTAAGCA 
    TGAGATTAGC TTGGCTGAAC ACAAATAGTG GCAAGAGAAG AGGAATCAAA 
    TTGAAAGAGA AATTGAATGC TGCTGCTGCG GCTGCCAATT CGTATTGGAG 
    GAAGAAGGCC TGTGTTGATT GGTGGCAGAA TTTGGATGCT GCAACACACA 
    AGAAAATCTG GACTTGTTTG TTTGGGAAGT CGGCTAAATC TGTGGTATGT 
    GTTTTGGANG GATGTANTTA TATTACA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21559 [Map]; Strand: w
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2095-1 - 3-prime edge 
    AAGAGAACCA TCGGAGGATC GCCGACCTAG GATTGGGGAT AGTATTAGCC 
    ATTGAAGAGG AAGACGAGTG GGAGTGGTAC AAAGATATGT GAGATGTTAG 
    CGAATCGATA AGTTGATTCT GAGCCATGGA TGAAGCAGAG GAGAAGAATT 
    TGGAAGGGAG ATGGCGATTT TCCATTGTTT CCTCTCTTTT TTTCTTTCTC 
    CAGAGGAAGA CGACGAACGG CTAATAACTT AAACCAACTC AATACCCAAC 
    CGGAAATTGG AACCGGTCTT ACTTGCTAAC CAATCAATAG GAGTCTATTT 
    AAAACGGGCC TGGGCTTGAG CCCATTGTAA ATTCTCGATG CTCTTCTTCT 
    TAGACAGTAG TAAAATTGGG CCTTTTTGTC TCGGCCAAGC CTTTTTTGCG 
    TCGGCGATAC TCTTTTTCTA TTTCTCTTAG CTACAGTGAC CATCTCATCT 
    CATGTATTTG CCTTGTTGGT GTGAAAGGAA TCTCGCATTA ACCAACATTT 
    GACTTTTACT TTCTTTTTAA ACCTATCACA CACACACACA TGCATGTGAC 
    ATATGTATCA CATCATCTCA AATTTCAACT TTTTCTTTTT CAGTTTTGAC 
    GAAAAACAAA TCAATATTAC ACATTATGCA TCTGCAAATT TTAGCTTTCA 
    ACTTTTTGCA TTTTACACTA CAAATTTCAA TATATCTGCT CAACACACTA 
    TGTATTTTGA AATTTAAATA GTTTACATTT GGTGTTAAAA AAATAC

AT4G00060.1

Model type
Protein coding
Short Description
Nucleotidyltransferase family protein
Computational Description
maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR