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15-2098-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • desaturated green (PATO:0001272)
    (Leaves::pale green)
sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)
    (Flowering & Growth::growth defective)
seedling (PO:0008037)
  • desaturated green (PATO:0001272)
    (Seedling::pale green)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22778112 [Map]; Strand: c
      • AT3G61560.1 - [+] show detail - Reticulon family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G61560.2 - [+] show detail - Reticulon family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2098-1 - 3-prime edge 
    GNNANGGNNN NNNNNNGNNN GGNNNNGNGG ANTGNTTNNN GGGNNAATTG 
    AAACGGACAA AGTATTTTAN CGACCGTTAC CGACCGTTTT CATTCNATGC 
    TTGATCTGCT ATATGATATG AGGATTGATT ATGTTTGTTG ATAATAAGTG 
    TTTTNGCTAT GTTTTCAAAC CATTTGGATT TGTCTTACTG TTGCCTTATG 
    TTTGCAGCGG CTGATGTGTT CTTGTGGAGG GACAAAAAAC TCTCAGCTTC 
    TGTNCTTGGT GTAGCGACTG CCATATGGGT TCTGTNTGAA TTGGTTGAGT 
    ATCATTTCTN GAGTNTTGTG TGTCACATTT NGATNTTCGC TCTCGCTGCC 
    CTGTTTTNAT TGTCCAATGC TCATGCCTTT ATGAACAAGT NANCCTACCA 
    NCCCANGCCN TCNNCCACNC NNGCCNTANA NGCCNANNAC NNNNATNNCA 
    NTNGNAGNNG CANNNTGANN CACANCANNT TANCNNANNT ANCGNAANAC 
    ANANNCACTN NAAGANNGCN NCNANGAANA ATAANNANCN TAACNANTGN 
    TNTTNNACGC CNACGNNNCC ANAGNCANNG CAGNNGAAAG GNNNNCGNNG 
    CGNNNGGNNN CNGCCNCGCN NACGNCNANC NTCCANNNTN NCNACAGNNT 
    ACANNNNNNN NANGNNCTTN CNNCNCNAAG NTTNCTNGAN CGATANNTNC 
    NGNANNTAGA NNNCANNTNC NNCNNNTNTN NTNNAGANNA CTAACNAANC 
    NANGCCTCNA NNTGNNNNAN GNTAGANNCA ATCTNTCNNC CNTNNANNGT 
    CNTCTANAAG NNCCNCGATN TNNTNTNNCA AACACNCCNN NANNANTNGT 
    TCNNNATGNT TCNNNGTATT CCCNCCNAAT ATTCNANGNT ACN

AT3G61560.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G46170.1); Has 1228 Blast hits to 1226 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 693; Fungi - 4; Plants - 505; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61560.2

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G46170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR