1. Home
  2. Mutant Lines
  3. 15-2116-1

15-2116-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9054437 [Map]; Strand: w
      • AT1G26170.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G26180.1 - [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2...
        Distance: -307; Region: promoter
    Flanking Genome Sequence: 15-2116-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC CATTGAGAGA TTAATCGATG GAATCCAATT 
    TCAGATGGGA TCAAGAAATT GAGTGTTTGA AAATTGTTTT AGCTTCCCTC 
    AATTTTCAAA TTCCCGCTTG TCCCTTTGGT ATAGGAGGAT GTCGGAGAGA 
    CAGTAGAAAC CAAATGGAGT TTAAGTAGTT CACCTCTCCT AGATTTTGTT 
    GTCGAGAAAA CCCTTTATAG ACAGAGGTTG CAGAAGAAAG AAGCAATCAA 
    ATAACCAAAA TAAACAATTA CCAAACCGGA TTTTAACCGT AGGTTTAAAT 
    TGGTATAAAT CCGGCTTAGT GTAATTTCAT CAGTCGAACA GTTTATCTCC 
    AGAATCAAAG ATAAACGGAG GAGAAGAGAG CTTCGTCGTC TTCTTCTTCT 
    TCTTCTTCTT CTTCTTCTTC TTCTTCGCCT CCATGAATCT CCTCAAGACG 
    ATTCATTACC AGTCTACCAT TACTCGATTT TACCGTTTTG CCCCTACACG 
    CTCCTTTGCT TCTTCTTCTG TGTCACTCTC TCCACAGAGA CACATAATCT 
    CTCTCGTTNC TATCTCTAAT CGNGGGAGGT GCTTNNCATT NTNGA

AT1G26170.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G26180.1

Model type
Protein coding
Computational Description
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2232, membrane (InterPro:IPR018710); Has 285 Blast hits to 285 proteins in 90 species: Archae - 0; Bacteria - 140; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Link
InterPro Scan - TAIR