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Mutant Lines
15-2179-1

15-2179-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 18288206 [Map]; Strand: c
  - AT4G39300.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon3 (3UTR)
  - AT4G39320.1 - [+] show detail - microtubule-associated protein-related
    Distance: -849; Region: promoter
Flanking Genome Sequence: 15-2179-1 - 5-prime edge
```
GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT TAGTATCAAC CCATGGACGC TTCAAGACCA 
AGACCAAAGC TAATGATGGT GTCACCGAGG AACTCCCAGT TCTAAAGAGA 
TGAGAGAAAT GGGAAGAGGA TCAGTGAACA AGATTCAGAA ATTGAAAAAT 
GCAGAGGTTC CTCGTTACAA TGTGCATGAA CAAAAGAAAG CAAATGCTGA 
CTTTAGTGAA GGAAAAAGGC CCCAAAATGT GTGGATC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 6196166 [Map]; Strand: w
- AT1G18000.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon1 (5UTR)
Chromosome: 1; Position: 6199861 [Map]; Strand: c
- AT1G18010.1 - [+] show detail - Major facilitator superfamily protein
  Distance: -37; Region: promoter

GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCGA 
GTCCGCTACT ACTAAAGAAA GAATCGTAAC AGACGGATCA CNAACCNGGG 
CACNTCCACC ACCCTGGCCN NANTTTACGA GAAGAATATT AAAATTCTCA 
TCTTTAACCA TTTTATCCGA TCATGAATGT GAGAGACGAG GGAAAAACTA 
CTGGCGGAGA AACACGGCAG GAGGAGAGGA GAATAAATCA CCGGAGAACA 
AATGGCGATT TAATTCTCCT CTAGCTCAAG TGAGCTTAAT GGGATTCGTT 
TGTTTCTGTT GTCCAGGAAT GTTCAACGCT CTCTCCGGCA TGGGAGGCGG 
TGGTCAAGTA GATCCAACCG CTGCTAACAA CGCTAACACC GCCGTTTACA 
CCGCTTTCAC CGTTTTCGGC CTTTTAGGCG GCGGGTTTTA CAACGTCCTC 
GGTCCACGGC TCACGTTAGC CGCTGGATGT TCGACTTACG TACTCTACGC 
CGGATCTTTC CTCTACTACA ACCATCACCA CCACCAAGCC TTCGCGATAC 
TCGCCGGAGC TTTACTCGGT TGCGGCGCGG GGACTTCTCT GGGCCNGAGA 
AGGAGCTGTG ATGACGTCAT ACCCTCCGCC GCATCGGAAA GGCACTTACA 
TAGCGGTTGG TCCTGGAGTN TCTTTCAATC TCGGCGGCGT TNTCGGTGGA 
TTTAATCCCC GGTTTATCCT TCAACTNCCA ACGTAATCTC CGCCGCATCN 
GTTCANAACT TGANCNTACA TAGCGGTTCA NTGTGTTTCA T

AT1G18000.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G18010.1); Has 758 Blast hits to 750 proteins in 174 species: Archae - 0; Bacteria - 91; Metazoa - 141; Fungi - 422; Plants - 82; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G18010.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G18000.1); Has 758 Blast hits to 750 proteins in 174 species: Archae - 0; Bacteria - 91; Metazoa - 141; Fungi - 422; Plants - 82; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G39300.2

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11630.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G39320.1

Model type: Protein coding
Short Description: microtubule-associated protein-related
Computational Description: microtubule-associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR