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15-2189-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6196232 [Map]; Strand: w
      • AT1G18000.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -3; Region: promoter
    2. Chromosome: 1; Position: 6199795 [Map]; Strand: c
      • AT1G18010.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -103; Region: promoter
    Flanking Genome Sequence: 15-2189-1 - 5-prime edge
    TAGCGGACAT TTTCATGGGA ATAAATATTA ACTAAAACTT AATTTTCTAA 
    CAAAACAAAA TTGATGCTCT CTACTGGTTT AATCTAATCC TAGTAAACTG
    TAATAACCTA GAGCGAAAAG AACATGTCAA TGAATGTTAT CTNGTTACGT
    TCTTTCTACG AAAATAAAAG TCAAACGTCA TTATTTTTAG AAAAACAATA
    GCTACTTCTT CACGTTGACA CTGACA
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6196168 [Map]; Strand: w
      • AT1G18000.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    2. Chromosome: 1; Position: 6199859 [Map]; Strand: c
      • AT1G18010.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -39; Region: promoter
    Flanking Genome Sequence: 15-2189-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GAGTCCGCTA CTACTAAAGA AAGAATCGTA ACAGACGGAT CACAAACAGT
    CACAGATCCG AGCCCTGTTT TGAGTTTACG AGAAGAATAT TAAAATTCTC
    ATCTTTAACC ATTTTATCCG ATCATGAATG TGAGAGACGA GGGAAAAACT
    ACGGCGGAGA AACACGGCGG AGGAGAGGAG AATAAATCAC CGGAGAACAA
    ATGGCGATTT AATTCTCCTC TAGCTCAAGT GAGCTTAATG GGATTCGTTT
    GTTTCTGTTG TCCAGGAATG TTCAACGCTC TCTCCGGCAT GGGAGGCGGT
    GGTCAAGTAG ATCCAACCGC TGCTAACAAC GCTAACACCG CCGTTTACAC
    CGCTTTCACC GTTTTCGGCC TTTTAGGCGG CGGGTTTTAC AACGTCCTCG
    GTCCACGGCT CACGTTAGCC GCTGGATGTT CGACTTACGT ACTCTACGCC
    GGATCTTTCC TCTACTACAA CCATCACCAC CACCAAGCCT TCGCGATACT
    CGCCGGAGCT TTACTCGGTT GCGGCGCGGG ACTTCTCTGG GCCGGAGAAG
    GAGCTGTGAT GACGTCATAC CCTCCGCCGC ATCGGAAAGG CACTTACATA
    GCGTTGTTCT GGAGTATCTT CAATCTCGGC GGCGTTATCG GTGGATTAAT
    CCCGTTTATC CTCAACTACC AACGTANCTC CGCCGCATCG GTCAACGACT
    CGACGTACAT AGCGT

AT1G18000.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G18010.1); Has 758 Blast hits to 750 proteins in 174 species: Archae - 0; Bacteria - 91; Metazoa - 141; Fungi - 422; Plants - 82; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G18010.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G18000.1); Has 758 Blast hits to 750 proteins in 174 species: Archae - 0; Bacteria - 91; Metazoa - 141; Fungi - 422; Plants - 82; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR