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15-2192-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9671114 [Map]; Strand: c
      • AT4G17250.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: heat ...
        Distance: 0; Region: exon1 (CDS)
      • AT4G17250.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2192-1 - 5-prime edge 
    TGCAGCAGAC ATATACACCT ATGGATGGCA ACGGCTTGCT GAACTCTGTG 
    TCGCTTAGAT TTCCATGTGA GTCGCAACCC ATCACTAGAT TTGTCTCACT 
    CTCTCGATTC TTCTATTTCT TCGTCTTCTT CTATGGAGAG AGAGAGCGAC 
    AGAGTCGTGT CTTGATGTTA TAAAATTGTT CAGAATCTTC AAAGAAGTTA 
    CTAGCTCTGT CCAGTGTCCA CTCAAAGTCA TAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9671229 [Map]; Strand: c
      • AT4G17250.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: heat ...
        Distance: 0; Region: exon1 (CDS)
      • AT4G17250.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2192-1 - 3-prime edge 
    TCGCTGCAGC TTCACTGATC TGTGGAGTTG CTATGTTTTC CGATCTTCTT 
    CACGGCTTCC GGCACCGTAA GTTCTGGTTT CCTTGCAAAT TCTTCTCTCT 
    CAACGCTACC ACTCTCACCT TTATCTCTGT ATGCNGTCAA ACTCTCATTG 
    GATCTCAACA CTTCTATGCC TAGTCGCCAA GATCAGCTTG CTAAACTCAG 
    CAGCAGCGTC TTCGTATGCA CCGTGATGGC TAATTCCATG CCTTCTCTTG 
    GTTACATGGT CACGCAAGAT CTCCTCATGA ACCTCACGGC TCTTGGGATT 
    CTAGTCATCA CCGATGTTGT TAACATCTGT ATCCAATTGG GTACAGGAGC 
    TATATATGTG TTCCCTCAAG AACACGCTCT GGTCATTATT CTCATGCTTT 
    TGATGTTTAT GATCTTGAGT TTCTCTGCTA TCACTGTCCC AGCCACAAAG 
    CGTTTCTTGG AGCTCAAGTA CAAGAAGAGA TACGAGTTTG CTTTGAAGCA 
    GTGTCCTTCG TATACAGAGA GAAGAAGAGG GGTTCCTAAG CT

AT4G17250.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits to 31 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G17250.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: heat acclimation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1).
Link
InterPro Scan - TAIR