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15-2211-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 436121 [Map]; Strand: w
      • AT2G01940.2 - [+] show detail - C2H2-like zinc finger protein
        Distance: 1044; Region: intergenic
      • AT2G01950.1 - [+] show detail - BRI1-like 2
        Distance: 4515; Region: intergenic
    Flanking Genome Sequence: 15-2211-1 - 5-prime edge 
    ATCTCGCCGC TGACCCNTNC GGATTGNGAA TNGGACNACT NNTGATNGCT 
    NTNAGGTGAG ATAATTNNAA TGNGGGTNCN GGANANAAAG GCNNCTGTCG 
    GTAGTTGGTG GACGGAGNAA AGGGAATAGA CCGAGCATNC CATGGGTGGG 
    TTANCTCATN NNANNGANTG ATTNATGTGT CTACCNAANC ATNTNNNNAC 
    ATGACACATC TTTATTTCCA AACCCNNGCC NANANCNNCN CNTNCCGNAC 
    AGGTCTATGA TGTGTGAACA TACATAATAA ATGAATGTCG ATNCATGAAA 
    GANAAAGAGT TTGATTGGGG CAAGTNTATA GATACATACA TATNCNCATA 
    TNTAGCAAAG AAAATATAAA ATANCAAAAA TAAGACGATC TTTTGCGTAT 
    GANATTGAAN AAGCTATACA CTACAAAAAT CTAAAATCCG AGGNGGGTTT 
    GGTTTTTGTA CATCTTTTGG GACCAGTTTC GATGCANAAA TTAGGAGGAT 
    NTAAAGACTT TAATAACGAG GACTTGAANA AATGACNTGA ATGTCTGTCT 
    GANANAACTA AAAAAGGGGG NTAAGTAAAT AAAANAGTGA CAAATGCCTG 
    CCCNTTNCTC CGNTTNAACT CTNTGGNCCT GAAAACCANN NANNTTTTTT 
    TTCCCNCCNC NTTAATGGNC CCTCANTNGC NTTGGAAGNG NCTTTTTTTC 
    TNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 436042 [Map]; Strand: w
      • AT2G01940.2 - [+] show detail - C2H2-like zinc finger protein
        Distance: 965; Region: intergenic
      • AT2G01950.1 - [+] show detail - BRI1-like 2
        Distance: 4594; Region: intergenic
    Flanking Genome Sequence: 15-2211-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
    ACACACATGA ATAATGCACA ACAATTTGAT GAGTGGCTAT TTATTTATCT 
    CTCATGAATA TTAGGTGTTT TTAACTATCT ATTTTTAAGG TCAACTAGAC 
    TAAATACTTA ATTACTTAGA ATCCAACGAC CAGTTCTATA TAAAATTTGA 
    TATGGACTAC TTCTGAGTAT TGGTCATATG TGTGAACAGT AGAATTATTT 
    GACATGCATT TTCTTGTAAA ATTTTACTTA AAATAAAATC AGAAGTCTCT 
    GTAAAAATTT ATTTCGAGAC AATAAATGAG TAGCTAGAAA ATTTGCTAAA 
    AGTTGTAATA ACAACAAGTG AAAATGGGTC GGGCTGTTTT ATCATCATTA 
    TAGATCAACA CTTTTTGTCC GAATCTAACG AAAGATGAAA CGATGTTTGT 
    TTATGAACCT CGTTATAAGT GTAACGGTCA CGGACCAAAA CGACATCATA 
    ATAGTACATT TCCCATCACT CCATATATCA ACTCGTGCCA AGCAACTACT 
    TACCCTCTTT CAAACTTACT AAATATACTG GTATACATTA GATGTCGATA 
    ATCTCTATCA TGCAGGGACT GTTTTGATCC TTAAAACGTG AGATTTGTTT 
    TCAAATATAT CACCTCAAGC T

AT2G01940.2

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Curator Summary
May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.
Computational Description
SHOOT GRAVITROPISM 5 (SGR5); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.2); Has 5058 Blast hits to 4353 proteins in 195 species: Archae - 1; Bacteria - 0; Metazoa - 3999; Fungi - 151; Plants - 716; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01950.1

Model type
Protein coding
Short Description
BRI1-like 2
Curator Summary
Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.
Computational Description
BRI1-like 2 (BRL2); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 216585 Blast hits to 138440 proteins in 4665 species: Archae - 155; Bacteria - 20149; Metazoa - 71991; Fungi - 10737; Plants - 87183; Viruses - 376; Other Eukaryotes - 25994 (source: NCBI BLink).
Link
InterPro Scan - TAIR