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15-2373-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 484376 [Map]; Strand: c
      • AT2G02030.1 - [+] show detail - F-box family protein
        Distance: 547; Region: intergenic
      • AT2G02040.1 - [+] show detail - peptide transporter 2
        Distance: -3047; Region: intergenic
    Flanking Genome Sequence: 15-2373-1 - 3-prime edge 
    AGTATGTAGA GTTAACGGAG CATAAAATTT TGACAATATT GTCGTCACAC 
    CACTCAGTGT AAAGGCGAAT GCTAGTACCA AGAGCAACTC CAACCATAAC 
    ACACCAAATT TGGTGTTTTA ACAGTCTCAA TTTTTTTTCA ATCTCCAACC 
    ACAATCATCT TACCCTAAAA ATAAAATGTA TTCTTATTAT ATTATTAAAT 
    TTATAATTAT TTTTACTTTT TTAATAGTTT GATAAACACT AATTATTTTT 
    GAACTGATAA ATTAATATAA GATTACAATC GAGAATT

AT2G02030.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G12870.1); Has 1703 Blast hits to 1685 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1701; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02040.1

Model type
Protein coding
Short Description
peptide transporter 2
Curator Summary
Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.
Computational Description
peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink).
Link
InterPro Scan - TAIR