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Mutant Lines
15-2386-1

15-2386-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 530521 [Map]; Strand: w
- AT4G01260.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
  Distance: -974; Region: promoter
- AT4G01265.1 - [+] show detail - raffinose synthase family protein / seed imbibition protein-related
  Distance: 0; Region: exon6 (NonCoding)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCTAGGCA TCCACAATTC TCATTGGACA TAATTCCTGG 
TTAAGAAACT GGATACGCCA CCTTTGATTC GTAGTGCTCC ATACCAGAAA 
CACTTGGTTT GACTCCTCCC CAATATCCAG GTTATCGCAT GCCAAACATA 
AACATATTTG AGTGAATTGT TACTCTTAAT ATCTGTGATA ACATGTCCAA 
GACTCAATGC AGGGTCATCC ACCCGGTGGC CTTCTTTGCC GTCCTTTTGA 
AACTTGTGTT TCTCCTTTAT GTGAGTTAAC CGGTTTGCGA AACTGAAGGA 
ATT

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 530452 [Map]; Strand: w
  - AT4G01260.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
    Distance: -905; Region: promoter
  - AT4G01265.1 - [+] show detail - raffinose synthase family protein / seed imbibition protein-related
    Distance: 0; Region: exon6 (NonCoding)
Flanking Genome Sequence: 15-2386-1 - 3-prime edge
```
ACTAAGAATG GACTTGGTGG AGGCGTCAAA CTTGCAAAGA AGTATCACCA 
GGCTTTGGAA GCT
```

AT4G01260.1

Model type: Protein coding
Short Description: DNA-binding storekeeper protein-related transcriptional regulator
Computational Description: DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G25210.1); Has 1175 Blast hits to 958 proteins in 167 species: Archae - 0; Bacteria - 77; Metazoa - 317; Fungi - 112; Plants - 260; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01265.1

Model type: Pseudogene
Short Description: raffinose synthase family protein / seed imbibition protein-related
Curator Summary: Pseudogene of AT4G01265; raffinose synthase family protein
Computational Description: similar to ATSIP1 (ARABIDOPSIS THALIANA SEED IMBIBITION 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G55740.1); similar to unknown [Populus trichocarpa] (GB:ABK95734.1); contains InterPro domain Raffinose synthase (InterPro:IPR008811)
Link: InterPro Scan - TAIR