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15-2423-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8156787 [Map]; Strand: w
      • AT1G23030.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2423-1 - 5-prime edge 
    ATCGACGGAG GTTGATCGGC GACGGCGTAA TGGCCGGAGG AATCGTCTCA 
    CCGGCCTCTC TACTCGACCT AATCGCTGAT ATCGTCGAGA TTCCACTCAA 
    CACCGGAATG TTCAAGAAGG ATTGCGCAGA TCTCACTCGA CGAGTTTGTC 
    TCTTAACGCA TTTGTTAGAG GAGATTAGAG ACTCAACTCC TATCGATTCC 
    GCCGCTTCGT CGTCGTCGGA GAATGATTGG TGGTCTGATC TCGTGGTCGG 
    ACTTCAAGCC GCGAAGCGTC TTCTCTCCAC AGCTCGATTC CAAGCTCGCG 
    ATTCCTCTGT AAGCAAAAAA ATCTAACTAA CTCCTTAAAA AAAATCAAAT 
    CACGATTTGT TGTTCTTCAA TCTCATGAAA ATTCCCAGAT TCATTANAAT 
    TACCGGTTAA ATGTAATTAG ACCATTGGTT ACAATACGGT TATCTCCGAT 
    TTAGCTGAAA GATTTTGAAT TTTGTTGATT AAAGGATGGT GCTGCGAANA 
    GAATCTCATT TCAGTTCCAA TGGNGTTACA TGGAAGCT

AT1G23030.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71020.1); Has 7493 Blast hits to 5002 proteins in 288 species: Archae - 0; Bacteria - 26; Metazoa - 2087; Fungi - 726; Plants - 3867; Viruses - 3; Other Eukaryotes - 784 (source: NCBI BLink).
Link
InterPro Scan - TAIR