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15-2471-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24395997 [Map]; Strand: w
      • AT1G65610.1 - [+] show detail - Six-hairpin glycosidases superfamily protein
        Distance: -637; Region: promoter
    Flanking Genome Sequence: 15-2471-1 - 5-prime edge 
    CTGATATGTT ATTGACAGAG ACAGAGAGTG ATAATATAGT TTCTGATAGG 
    GAGGATTTGA TAAAACAGAG TGATTACATA ATGTTTGTGT TGATCCTTCT 
    TAGTTCTTAC CGTCTATAGT TTCCCTATTT TTTTAACACG AAATTTCATA 
    GTTTGTGTAA CTTGCGGCAG AAAATATAGA TAGCTCACAT AGCTATGATC 
    TAAATATGAG CATTCGTGTA TATGATTTTA TGGTAGCTAG CGTTGTTGAC 
    AGGCTGCGGT AAATTGGTCT TCGCTAGATG TTGTGAAGCG TATGGAAAAT 
    ACTATAATGA GCTAATATCT ATTGGGCTTT CATTTAGCTT TCGCTATTTA 
    TTAATTGGGC TTGGGCAACC CTTCACAAAC TGTTNATTTT GTTCCAAGGA 
    TTTTTCAGTT CAGAGATTAT GTAAGCAAAT TTTGTTTTCT TCACGTAACA 
    GAANNTCGAT CTAACTTATG TCGAGATGAA TTGCTAAAAG AACCATTATC 
    CCACGTAAAA AAGGATTAGA AAACCCCNNT ACNTTGAGTG AGGAACCCTT 
    AAATNTTGTA TAGAGGATTG GGGAGANANG TACCCACTAT CAACTATGGN 
    CNGGTTTAAA GTAANAAATT ACCAAGCCCN GGGCCGNCGA CCCACNCNNN 
    CCCNNNNNAA AAANAAANNN GGGAACGGAG NGGGGGGNGG GNNGAGGTAN 
    NGC

AT1G65610.1

Model type
Protein coding
Short Description
Six-hairpin glycosidases superfamily protein
Computational Description
KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR