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15-2516-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3328037 [Map]; Strand: w
      • AT1G10155.1 - [+] show detail - phloem protein 2-A10
        Distance: 0; Region: intron2 (CDS)
      • AT1G10160.1 - [+] show detail - transposable element gene
        Distance: -934; Region: promoter
    Flanking Genome Sequence: 15-2516-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CAGGACGCCT GCTGAACTAA AGAAAGTGAG TTGGTTAGAA GTAACCGGTT 
    CGTACGACAA GATAGAACCA GGCAAAACAT ACCGAATTGG TTTTAAAATC 
    TCGTTCACAG CTGATGCAAC CGGATGGGAC CAAGCTCCAG TTTTCATGTC 
    AGCAAAAATT GGAAAGAAAG GGAGGACAAT TTGGAAGAGG ATCAAATCGG 
    TTAACAATAA CTTTGACAAA CTCAAAGGCG GAACCGGACC GGTTAACATA 
    CCAGATGAGA CTGATGGTCG GTTTGAGATC TTTGTAAGTC CCAAGGTAGC 
    AATAAACCAA GACACCAAGC TCCAATTTGG TTTGTATGAA GTGTGGACCG 
    GAAAATGGAA AACAGGCTTG TTGATCTATG AAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3328044 [Map]; Strand: w
      • AT1G10155.1 - [+] show detail - phloem protein 2-A10
        Distance: 0; Region: intron2 (CDS)
      • AT1G10160.1 - [+] show detail - transposable element gene
        Distance: -927; Region: promoter
    Flanking Genome Sequence: 15-2516-1 - 5-prime edge 
    CTNGATAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATAA ACACCAAAAG ACTCCAGTTT ATTATTTTAC 
    TTTTAACATG GAAAACCAAA AACCGGTTTA TTCAGAATCA AACTGATTTT 
    TATTTTGGTT AATGTGTATA TAACGTAAGA TGAAGGGTGT GTACCAACCT 
    GTCTTCGTTA GGGATGACCC AATACCGAGA ATCACCTCCC CATATGAAAT 
    TAAGACCACT TGGCTTAAAG ACCCATGCTT TTCTAACAAT CTATTAACCA 
    AAGTTTGATT TTTAGTTGCA AAAAAAAAAG TTNGATNTTT AGTTGCAATA 
    AAATNCCCAN CATATNTAAA ATAACTTAAG NGAAAAAACT AATAACAATN 
    GACTNGTTAT TACATCTTGT TCCATGTNGG ATTCTGCCTC GTAGNGANAA 
    CTNTTGACAG CTTTTTGGAC ANACATTTCT CTCTTTCTTC TTNGCNGTTG 
    GTTTATAAAA NAACACTTCT CTTAAGTNGG CTTTATNTAN ANATTTGTTT 
    CTTTTCACTA TATGGAAACT TTCTGTAGAA AAAAATTAGT NTTGGGACAN 
    AANAAGANTA AATGAAGTTG GACCCAATCT TTTNTTCTNA ATATTCTCCT 
    NGNAAGTTTT ACTTTAGGGG CCATANCCAT GTAAAGGGTT AATTCANTTG 
    GATGGCAAAA GCTAANCAAA TTTCCCAGGT TGGGGGCCNC TTCNTNNATC 
    NNTGCTTTGG NNGAAAANAA AAG

AT1G10155.1

Model type
Protein coding
Short Description
phloem protein 2-A10
Computational Description
phloem protein 2-A10 (PP2-A10); BEST Arabidopsis thaliana protein match is: phloem protein 2-A9 (TAIR:AT1G31200.1); Has 113 Blast hits to 113 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10160.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 3.9e-39 P-value blast match to GB:AAA67727 reverse transcriptase (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR