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15-2546-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19244085 [Map]; Strand: w
      • AT2G46820.2 - [+] show detail - photosystem I P subunit
        Distance: 0; Region: exon3 (CDS)
      • AT2G46820.1 - [+] show detail - photosystem I P subunit
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-2546-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTCNATNCC 
    TAGTTAACGC CGCCGAGNTG ATNNAGATTG NTTNGACGGG NACCAAATGG 
    GCGGACCTGA ANNGAATGTT TTCGATTNNN AATTACCANC CCGGGCCAGN 
    CATACCACCC ANTGNCCTAN NAAAACCCAT TTCGAAAGTT TGAAACTTTA 
    AACTCGAAAT TTAAAGTGAA AAGAAAAATC TTCAGATTTA TGGAAAACGA 
    ACAGTAAGCA GTGGCTTTAG CGGCACGGGT ATGAGACTGA ATCGGAAGTG 
    TGGGAAGTGA AATGCACGAC GGAGAAGAGG CGGAGGCGGA GGCTAGTCGA 
    GAAGGAGGAG CTCTTGAATC GATGATGGTT GAAGAGGAAG AGACTGAAAG 
    AGAAGCCATA GCTATTGAGC TTCAAGCCTC GGAAGAATCT CACAGAAACA 
    AAAACAAAAC AGAAACAATT AGGTTTATTA TCTAAAAGAT TAATGGAGAG 
    CAAGTGTTGA AAGAATTTTG GGGATTGTGG AGATGCTTTC TCTGTTACCA 
    GTCGGAAACT ATTCGACCAC TCGTTTTTGG GTTTTCCCGA TCAGGATAGT 
    GCTGACGTGG CGGACGTATA AGACNATCTT GGGAGTTNTA TTGGATTAGA 
    TAGAATTNGG GTTTTTNGGC TCCTTTTTTA AAATTANGAC TCNATTCTTT 
    GAAAACAAAA TTTCACTCTT GCTACTATAC TATNGGNCTA TAATTATAAT 
    TNAACAAAAT TCATTATN

AT2G46820.1

Model type
Protein coding
Short Description
photosystem I P subunit
Curator Summary
Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.
Computational Description
photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 450 Blast hits to 450 proteins in 73 species: Archae - 0; Bacteria - 149; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G46820.2

Model type
Protein coding
Short Description
photosystem I P subunit
Curator Summary
Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.
Computational Description
photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR