1. Home
  2. Mutant Lines
  3. 15-2559-1

15-2559-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9553472 [Map]; Strand: w
      • AT5G27150.1 - [+] show detail - Na+/H+ exchanger 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-2559-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGA ATCTTCTCTC TTCTCTATCT CCCTCTCTCT 
    TAAAAAGGGA CCGTACACAG TCTCTCTCTA TTTCCAGTAA AAAATCGAAA 
    TTTCGTATAA TTTCCTCAGT CCCGTAATTT TCTCCTCTTT TTTTCTTCCC 
    CAATTCCTTC AATTTTCGAA TT

AT5G27150.1

Model type
Protein coding
Short Description
Na+/H+ exchanger 1
Curator Summary
Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development.
Computational Description
Na+/H+ exchanger 1 (NHX1); FUNCTIONS IN: protein binding, sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: response to salt stress, lithium ion transport, sodium ion transport, leaf development; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ exchanger, subfamily (InterPro:IPR004709), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Na+/H+ exchanger, isoforms 1-4, conserved region (InterPro:IPR018407); BEST Arabidopsis thaliana protein match is: sodium hydrogen exchanger 2 (TAIR:AT3G05030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR