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Mutant Lines
15-2573-1

15-2573-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 30225306 [Map]; Strand: c
- AT1G80400.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 0; Region: exon1 (5UTR)

GNNAANACNN AACCANNAAN NGNNAANGNA CCCTTCCGNN CCGANTANNA 
CNCGTGNCNA ATAAGCTATT GTTGAAACCT TCTTCGTCTT CTTAGTACTT 
GTTGTACTCT TCTTCTTTTT CATTCTTCAC AGGAAGACAA ATTAAAAAAT 
AGGAATCGGC TGATTTTATT TTTGCAGCTT TCGCAGAGTT GCAGTAAATC 
GGGAGAAGAC TGATTTATTA TTAGTTTTTT ACTAAACTCA TGATTACAGA 
TTTCGTCCTT CTGTCTTAAA TCTTTAACCG TTGGATCTTA AGGGTTTCTA 
TGTACTAATC TGATCGGACG GTCGTGGATG ACTCCTTGTT TAGAAGGTGC 
TTTGTTGAGT TTATTACCTG ATTAAGCAAT TTCCTTCCAG ACAAAAACAA 
ATCTCATAAT AGTCTGAGGT TTATTGATTT GTCTATTCCC AAATCATTTC 
TTAAAATTCT ATAATGTTTC TTTTGTCATT CTAAATTTTA AAATTATACT 
GTAAATGTTA TTGATATATT TAGTTCTTAA TAGAGTTTTA AACCCTTTTT 
TCTAATGCAT GTTAAGACAA AGAAATTTAA TATGAAGTTC ATTATAGAGA 
TATGGATC

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 30225373 [Map]; Strand: c
  - AT1G80400.1 - [+] show detail - RING/U-box superfamily protein
    Distance: 0; Region: intron1 (5UTR)
Flanking Genome Sequence: 15-2573-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TCTTCTTCTT CTTCCTGTTT TCGATCTTCT GTCTTTTTCG GTAATTTCCG 
AATTTGTGTT TCAAGACCGT ATCATCTTAG CTACGATTGA ATTTGTTGGA 
ATT
```

AT1G80400.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26580.2); Has 10084 Blast hits to 10056 proteins in 295 species: Archae - 0; Bacteria - 8; Metazoa - 2540; Fungi - 826; Plants - 5176; Viruses - 44; Other Eukaryotes - 1490 (source: NCBI BLink).
Link: InterPro Scan - TAIR