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15-2598-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22252565 [Map]; Strand: c
      • AT3G60210.1 - [+] show detail - GroES-like family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-2598-1 - 5-prime edge 
    CTCAGCAGAC CCTTCTCGGT ACAAATCTTA ATCCATGTTT CTTTGTTTTC 
    TGGATTAGCT TCTCTTTTGT CTGTGTCTTC CCCATCATTG ATTCCTTTCT 
    TGTTTACGGA TTTCTATAGG AATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22252681 [Map]; Strand: c
      • AT3G60210.1 - [+] show detail - GroES-like family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-2598-1 - 3-prime edge 
    CTGCTGAGGT AGAGTAGGAG CATTGGTTTT GATGGGGAAG GACAAGAAGG 
    GTTTAGGTAC TGTAATGAAA CTCGAAGCCA TTGGATAAGG TTAGGTTCCT 
    ACTCGGTGAG TAGTCACGAC ACGGCGAGCT ATTAGGTTGG GGAAGTTGAG 
    GAGATTCGCT CGTGCTTGCT GTGTTGTTGG ACAAACCTTT CTTCTACAGA 
    CTTCTCTTGA TGCTTCCTTC CTTGTGTGCT TTGTTTGATT TAGTTTGGGC 
    CTAACTATGT TGGCCCGAAT ACTTTTGCTT CTCATCTTTG AAAGCTAGTT 
    CTCTTAATAC GGTTTTGAAG AAAATATTTT AAAATTTTAA CACTTAGAAA 
    AAAACAAAAT TGTTGAAAAA AATAAAATAG AAGTTTTAAA ACATTTTTAA 
    ATAAAAACAA TTTGGATGTT GTGTACAATT AGTTTAGACA AAAATTTAGA 
    ATTTAACACT TCAAAAAAAC CTTTAAACTT TAATAGTGAT AAAAAAAAAA 
    AAGNTTTAAA ANNAATNNTT AAAANTTAAA ATTTTNNGTA ANCCNNAAAA 
    AGGGNNCTTC TTTTTTTNCN TTNGGGCAAA NCNNTTTTCC TTNNAAAANC 
    TTNCNCCTTC NANAAGGGAA AGGGANAAAA ANCCGGGGCN GGNANCACCG 
    NGGNNCNTTT AAA

AT3G60210.1

Model type
Protein coding
Short Description
GroES-like family protein
Computational Description
GroES-like family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chloroplast chaperonin 10 (TAIR:AT2G44650.1); Has 3302 Blast hits to 3296 proteins in 900 species: Archae - 7; Bacteria - 1960; Metazoa - 11; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 1153 (source: NCBI BLink).
Link
InterPro Scan - TAIR