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Mutant Lines
15-2609-1

15-2609-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 8883454 [Map]; Strand: w
- AT1G25330.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -1354; Region: intergenic
- AT1G25340.1 - [+] show detail - myb domain protein 116
  Distance: -1627; Region: intergenic

ATTGAGAGCA GTCTTGCAGA CTTCCAGTAA AATCCTCATT GAGCCATTTA 
TTCCTAATTA TGATTTATGA TTGCTTTTGT TTTTGTTTTT GTGCCTAAAG 
ATGATTGTTT GTTACCATAG TGTCGTCCTC GGATCAAGTG GGCTCTAAAA 
ACGTCACGAG TCGGCATTAT AACACCATCG GCAAGTGTGA TAGTCCAACA 
TCTAGGTGTT GGCGACGAGT CCACATAATA GAATTTTGGT GCATCTTTTT 
TGAGATTGAT GGGATCAGCT GACCGAGTTC ATATATATAT ATACTCATTA 
TGTCTCATTA AGATAGATTT TTAAAGAAAA AAAAGTCTCT CACAAAGATA 
AACGTTTTAT GTTATCAATA CAAAATTTAN AATTTTTTTC CTATTTTGCC 
CTTCATTAAT CATTACTACA TGGTTTCTAA TTTTTTATAA AAAAAAAAAA 
TNCANCCGAA AAANNAGTTT TTNNCNTTAN TNAAAAAANN NTTTCNAANT 
TTTTTTTTTC CATAANGGCC CCAANTTTTT NNTTNNAATN TTNNGNNTNA 
AAAAAAAAAA GTTTNTTTTT TTTGAAAAAN AAAATTNNGN GGGNNAAAAA 
AANNNTTNTT TTTTTTNTTT NAAAAANCGG GAANTNTTTA AAANCNNNNT 
NTTTNNAAAA NAAAAAAAGA NNNTTTTTNA NNAAANNNNN AAGNNNNNCN

AT1G25330.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 1 (TAIR:AT1G18400.1); Has 2000 Blast hits to 1994 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 45; Plants - 1913; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25340.1

Model type: Protein coding
Short Description: myb domain protein 116
Curator Summary: putative transcription factor (MYB116)
Computational Description: myb domain protein 116 (MYB116); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 62 (TAIR:AT1G68320.1); Has 8701 Blast hits to 8019 proteins in 468 species: Archae - 0; Bacteria - 0; Metazoa - 786; Fungi - 397; Plants - 5757; Viruses - 6; Other Eukaryotes - 1755 (source: NCBI BLink).
Link: InterPro Scan - TAIR