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15-2636-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6947629 [Map]; Strand: c
      • AT1G20030.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
        Distance: 285; Region: intergenic
      • AT1G20040.1 - [+] show detail - pre-tRNA
        Distance: 1231; Region: intergenic
    Flanking Genome Sequence: 15-2636-1 - 3-prime edge
    AGTATGAAGG TCTCAGACAA GTGTTTAGTG AGGCGATTAT TGGCAATGAA 
    GATATCCAAC TACCACATCT AAAGAAATGG CTTTTAGCGT CATGACAAAT
    AGAGATGAAA ACAATCACCT CTTTTACGAT ATAACACGGG TTATATTTCA
    ACGAAGGGAA TTAGCACTCT TTAAATTCAA TTACAATGTT TATGATCTGT
    ATCTTTAGGC ACGGTTCTAT TTATGAGATC GTGTAGGACG GCTTCATCAA
    AATTATTATC GAACTCTTCC AGCGCCTGAC TGGTGTCGAC TTTATGATCA
    TCACCCACCA AATACTTAAT ACAATACTTA GTCTAGCACC CTTTTTTGGA
    TTCAGAACGT TGAGGCTCGC CACGAAATTA CAAGTACAAC AAAATAGTGG
    TAAAATCCAA TTAAGACGAT TTATTATTAT GAAAGATACA TGGCTAGTGA
    TGAATGAATT GACATTGATC AGAATGATCA AAATATTTGA GAAAAACTAA
    ATATTCCTCA GCTTTAACTA AATGATGTAA CCAAAAAAAT TTCAGAAGTT
    TTCCTCAAAT ATTTTTCAAA TTTTATGTCA GCATAGTTAG TATGGAACTA
    GCTACTATTA CATTCATTTC CCATTTCTAA GCT

AT1G20030.1

Model type
Protein coding
Short Description
Pathogenesis-related thaumatin superfamily protein
Computational Description
Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75800.1); Has 1614 Blast hits to 1596 proteins in 182 species: Archae - 0; Bacteria - 45; Metazoa - 56; Fungi - 77; Plants - 1416; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20040.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Leu (anticodon: CAA)
Link
InterPro Scan - TAIR