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15-2682-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5152675 [Map]; Strand: w
      • AT5G15800.1 - [+] show detail - K-box region and MADS-box transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G15800.2 - [+] show detail - K-box region and MADS-box transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-2682-1 - 3-prime edge 
    CTCAAGACAC TTGATCGGTA CCAGAAATGC AGCTATGGAT C

AT5G15800.1

Model type
Protein coding
Short Description
K-box region and MADS-box transcription factor family protein
Curator Summary
Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.
Computational Description
SEPALLATA1 (SEP1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G15800.2

Model type
Protein coding
Short Description
K-box region and MADS-box transcription factor family protein
Curator Summary
Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.
Computational Description
SEPALLATA1 (SEP1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR