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15-2696-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5700881 [Map]; Strand: w
      • AT2G13680.1 - [+] show detail - callose synthase 5
        Distance: 0; Region: intron25 (CDS)
    Flanking Genome Sequence: 15-2696-1 - 5-prime edge 
    CTTGCAAGCA AGGTTGGTGG TCTCCCTTTG TCATCAAAAA TACCGTTTTC 
    TTCTTATTGC TAAACTTCTC ATCTTGGTAC AGATACCGAT AGCATTGGAT 
    ATGGCAGCTC AGTTTCGAAC AAGAGATTCT GACCTCTGGA AGCGCATATG 
    CGCAGACGAA TATATGAAAT GTGCNTGTCA TTGAATGCTA CGAATCTTTC 
    AAACATGTCT TGCACACCTT GGTAATTGGG GAGAATGAGA AAAGGTATTT 
    CCTCATTCAT CAGAAAAGTT CTTGATTATG ATTTATGAAG CACTTTATAA 
    ATCATTAAAA ATCTATAAGG AAACCAGCAC TCCAACTTTT NTCTTNTGTN 
    GAANCNACTG GCNGNCCTAT TAAANTTGAA NATAGAAGNN CTTNTANCAA 
    NGNTCTTANT TNATTTTTTG ANGNNTTNTA ANAANAATNT TTCCCCCNNA 
    GGGGGNNTTT TAAATGGNGN NAANNNNCCC TTNTTTTGGA AATAAAAAAA 
    AATNNTTNTC CNTNNNNNTN TTTTNTNGNN CNCCCCCNNN NNAAAANCNC 
    NNTNTTNTTT TTNNNCTNTN NTNGGCCNNN AANAANNANA NNNGNNNGGN 
    NANTNGNGTA ANTAAAANGG GGGGNGGNCN NATANAGAAN AAATNNNGGN 
    GNNNCCNGCG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5700765 [Map]; Strand: w
      • AT2G13680.1 - [+] show detail - callose synthase 5
        Distance: 0; Region: exon25 (CDS)
    Flanking Genome Sequence: 15-2696-1 - 3-prime edge 
    CTTGCAAGCA AAAATGGTGG CCACTGAATT AGTTTCAAAC TAGGGTCTGA 
    AGTATAAGGA ACAAGCAACA GATCCATCTC CCTGAAAAAA TAGTTGGTTT 
    TAAGGCACGG AAAATAAGGT ATTCATAAAG AAAGGTAGTA TAATACCTAA 
    GTTGTTACCT GTCACTGATT AGATCTTCCT CTCGGAAGCT GGAAATGATT 
    TCATTCCAGA GTTGGGAAAA TTTTGCCGCT TCAGTTCTTC TTGCTGCAGT 
    GACCTGCATA CAGATATAAT TTAGTAGATG TATGACAACA TTCTTTCCAC 
    AATCACTTTG TTGATAAAAC GAGCATCAAT CTTGTGTAAC CTCTGCAAAT 
    CTTTTTGACA AGGAAAACCC TCTTCTCCTT GTTTTATCAG AAGGAACCAG 
    GTACGTATTA AATGCACCAG GTAATGATTG GAACCTTGAC CTTAGCATTC 
    CAAGCGTTCG TATCTGGAAG GAGAACAGAA ATGAGTCTTT GTTAATATAT 
    TTTCATGCAG GAAGATGCAT CAAGTTACAC AGTTGCGTCT GTGATATATA 
    ATGAATTTTC ACTAGGAGAT ATACATTTGA AAACTAGATA TAAACTATTT 
    CGACGGAATA TACTACTTCA TGAACCATTT GGATTACACT AAATACAATC 
    ACGTTAAGGA GTTAGAAAAC TGTTACTAAT TAAAAATAAC GAGAAGATNT 
    AATGCACGAA TGTTAATCNA ATGAGTAGAA CNCAGGATGC GATNTAAGCC 
    AAT

AT2G13680.1

Model type
Protein coding
Short Description
callose synthase 5
Curator Summary
Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen.
Computational Description
callose synthase 5 (CALS5); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: in 6 processes; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR