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15-2701-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11582304 [Map]; Strand: w
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 1757; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 4212; Region: intergenic
    Flanking Genome Sequence: 15-2701-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCGCA TGACTTTCTT CTTCACAGAT ACAACGAAAG 
    TGACACCACA GTCATTAGTC CAAATCCCAT TAAACCGGAT CATGTAAATA 
    TGATGGTTTC GTTCAAGTCC AAGCCACAAC AAAATGATGC AATGGATAAA 
    AAAAACGGAC ATACAAATAA AGTTAGAAAA GAAAGCAACA TATAATTCCT 
    GGAAAAATCA TTCTGCAACC AAAATTTGTG GTGTAAGAGG AGATGAAAAA 
    CATTAGTCAC CTTAGTACTG GTCAGGAAAC ATTTGGTTGC CTCATGTGTA 
    AAGGACTCTC CAACAACTGA AATCCGATCC ATGACATCGT TAGTATTTAC 
    CTGGGAAATC AAGATGTGAT AGAGAAATAT CTTGTGCTTT AATTAGTTCC 
    TGCAAGTTAT AAATCACTTA AACACATCAG ACATATCCAT AAAAAGATTT 
    TATCAATGTA TGTTTAAATT TGACCATTTT CCGCTCAAGT ATCATGTATN 
    TNAGTACAAA ACTATTTATG TTAACAGTCT ACTANATAGC NNGANCNTAA 
    AAATTACNAA CTCAGAAANG ANAANATGTN NACCTACCTG ACCCTTTNNC 
    NGGGGGACTG AATCAATTTC TTATGTNGAG GTTATTTTNA ACTTCAGAAT 
    CTTTTTTTTG TATNGAAAAA AAAAAANTNT TCTTTNGGGG GGGGGNNNAA 
    NCNAANANTT TTTNTTATNC CCCANAAANT GTTGNGNTNG GAAANA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11582277 [Map]; Strand: w
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 1730; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 4239; Region: intergenic
    Flanking Genome Sequence: 15-2701-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    CATACCACTT TGTTTATTTC GCTATCTTTA TATCTTTATA TGTTTATTGT 
    CTCCATTTCC GAGCTCTAAC ATAATCAATC TGATTGGTAA ATGATTCAGC 
    AATCAGGTGA CAACTCATAT CTCAATTCCG TGTCAGGAGC AAATGTGAGT 
    GTTGAAGCAC CTGTTTGAAT CAAATTTTCT GCCTAGATGA TTTGGGTTAT 
    CTTAATGCCG TCTCAAAACG TTTCGCAGTT TATACTCATA TTGAGTGAGA 
    TTGTTTTCCT AACTTGATGA TTTCTGTTTT TCAGTCGGGT TCTTCATTAC 
    ACAGCATAAC CTGTCAAGAT TAAATAACAA AAAATTAACA ACCAGTCAGG 
    CTCTGTAAGA TTCTTACCAT GTTTTGTTCT TTTCCTTTGG GGATAATTTT 
    GTAGTTTTAT TTTCTTGTTT GTATGTTATA CTAGTCTGTG CCCATTATAA 
    TTGCTTACAA AATGTTTTGG ATACTANAGA GTGGATCTGC NAAGAACAAA 
    AGTTCAAGAA AGCGAATCAN NNNCCNNNAT CAAATGANAN GNCATGTNTN 
    TTTGANCTGN NCATAACCCN NNNNNCGGAG GCNANTNNNN NNACNNNANC 
    NTNNNNAGGN NNNGNNNNG

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR