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15-2722-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 45123 [Map]; Strand: c
      • AT4G00120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -1926; Region: intergenic
      • AT4G00124.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 152; Region: intergenic
    Flanking Genome Sequence: 15-2722-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA CAAGAAATAG AAGAACAATG ATGTTAAATT 
    GCCTATTTTG GTGTATAGGA GTTGTCAAAA GAGGAGAGAG AGAAGAAAAT 
    TAGGTCAAAA TAATGAGCAC TAAAAATGGA GACATGTGTT GAGTAACTAT 
    TACAAGAGCG ACTTATGCTT CCTTATGGCA ATGATATCCA AACCAAAGTG 
    CAACGCTCCT TTTTTGCCCT AATTTCGTAA AGTCTCTCTC CTTCTTCGTC 
    CTTAGGAAAA ACCCTAGAAA TTTAATCCCT TGTTCTTGAT CTTGCTTTTT 
    GAGTAACCAT GATTTTGACC ACACACTATT TCTTCTATCT TTTGTGGTCT 
    ATAGGATTTT GCTTTATATG TGTTTCTTGT ATTGCTCCGT ACGTACGTAT 
    ACGAATTTAA AAGGGTATNA CNNGGGNNTT TTTTAACTTN CNCAAAAAGA 
    GNCCCNTNAA AATTTNNTNG CNCAAAANGG GGNAAAATAT TGGGTNNTTT 
    NACNGNGNNA ATTTTTNNTT TTNNTNNGAA NCNANNNNNT AANNNNGGCN 
    AAGNGNTTTT TTTTTTTTTC CTTNCNNAAN AANAAAAACC CCGGGNNTTN 
    NGNNANNTTT TNNNNANTTN NCCCNNGGGG NGNGANNNCC CCCCCCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 45129 [Map]; Strand: c
      • AT4G00120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -1932; Region: intergenic
      • AT4G00124.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 146; Region: intergenic
    Flanking Genome Sequence: 15-2722-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTC 
    TTTCTTCTAA ACCCCACGGT TTCTTCGACA TTTTCTTACA AGCCCTTTCA 
    ACGGCCTTGA TTTGATCTTA GCTAGGAAAT ATGAGCTGGA TACGATAAAT 
    GACTTCTTCA ACGTTCTCTT TATGATTTTT GGTGTCAATT TCTAGTTCTT 
    AAGTTGTTTT ATTTGACGAT TTAACAGGAT CTCTCCCCCA TAACTCATTA 
    CACGAAGTGG GGACGGCTTC TTTCGACATT AAGGTATTGC CCATTGTTTA 
    AATTCTCAAG TGGATAAGTA AACTTATAAT CACCACTAAT TATATATAAG 
    TATATTACTA ATTAATCGGT CTAATTAAGA TACCGTCTAA ATGTCGTTGT 
    CCACATGAAA TTTCTATATG TTGCGTTCAT TTCATAGATT TAAAATCGAC 
    AAAGCTAGAA GATAAATTTT CAAAATGAGA CCTCACATCT TCTTTTCACA 
    TTGCCTTTAA TGAGTTCAAG ACAAAATACC CCGNNNCATG CATTAATGTT 
    CATACTTGTT ATATTCATCA ACAATATNCC ANNNCTATGC AACATNAANN 
    AATTNTNNNN TNNNNNNNNN GGCCGNNNNC CNNNC

AT4G00120.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00124.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR