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15-2747-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 583702 [Map]; Strand: c
      • AT4G01420.1 - [+] show detail - calcineurin B-like protein 5
        Distance: -2184; Region: intergenic
      • AT4G01430.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: -1896; Region: intergenic
    Flanking Genome Sequence: 15-2747-1 - 5-prime edge 
    CCTAAAGGTA CTACTGTATT TGTTGAAAGA TTAAGAACAT AGAAGAATCT 
    GAAGCATTGA AGTAGAAGAA TCTCACGAGA AGAGGAAGAA GCAAAACCAA 
    CGTGGTATTG GTCCAGTAGT AAATCTTTGA GATAGAGGTG ATGGGTTCGA 
    TGCTTATTGG GATTTTTTCT CTAAATGACA TGAATTTAAC TTCATGTGGA 
    TCTCATCTCT GAAAAATATA AGACATTCGA ACTTGAATTT CCAGATATTC 
    AAAAAAAAAA AAAAANAACC AANGNCNCCC NCAAATAGGG ANGNCGGNAT 
    TTNGGNCTTG TTNGTTNNCC TGNCCCTANC NACNGAAATC AGGGNCAANA 
    NCAAAAAGNN GTNCNTTTNT TTGTGGCTAA ATTNAAGGGT NTGGGGGCCC 
    TTTTNTNCNA ATAANGGNNN AGNTTCCANC CCGGGNNGNN NANCNCCCNC 
    GCNCCNCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 583818 [Map]; Strand: c
      • AT4G01420.1 - [+] show detail - calcineurin B-like protein 5
        Distance: -2300; Region: intergenic
      • AT4G01430.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: -1780; Region: intergenic
    Flanking Genome Sequence: 15-2747-1 - 3-prime edge 
    CCTTTAGGAT CTGCCCAGAA GGCTGCGGTA TCTTTGATCT CCCTTACCAG 
    GCCCCAATCT TCTCAAATCC CATAGCAGTA AAACAATTAA GAATCGTTGG 
    ACGTATCGCA GAGATTTTAA TGTAATGGGT TATAGATTAC GACCGGCTTT 
    AGATTCCGAG GCATGGCCGA CCGTTTAGAT TCGTAATGAT TTAGATATAG 
    TGCAGCCATT GTGCGTGAGC TACGTACATT ACATATGTCC ATGTCAACGA 
    TCCACTAGCT AGTCTTCTAA TTAAATTATT TGTTTTTCCT TGCATTACTT 
    TTATTTTGTT GGTAACTTAT TAGTCACAGT AATGACACAC TTCTCTTTGA 
    TCTTTGGGCA AAACCCTACT AAGAAAATTA ATAGGGTTAA AACTAGATAT 
    GGTGTATGAA AGCATTTTTT ACTTTCACCG ATTTCTCCAA ATTCAGGTAT 
    TTTTAATTTT AGTGTAGTGT TCATAGAAAT ATTTTTTCTC ATAAGAAATG 
    AAACCGATTT ANAGTAAAAA GTANTTAANC NTATCNNACA ACTTNTAACA 
    GACGCNNAAT TTAAAATATA NCATTTTTGC NATNCCTANN TCCGNTTTTT 
    TTTNANTTTT TTTNANNGGN NNNNNGGANN NNANNC

AT4G01420.1

Model type
Protein coding
Short Description
calcineurin B-like protein 5
Curator Summary
Encodes calcineurin B-like protein 5 (CBL5). Overexpression confers tolerance to drought and salt stress.
Computational Description
calcineurin B-like protein 5 (CBL5); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to salt stress, response to water deprivation, N-terminal protein myristoylation, calcium-mediated signaling, response to osmotic stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, flower, leaf; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G24270.2); Has 5545 Blast hits to 5527 proteins in 657 species: Archae - 0; Bacteria - 7; Metazoa - 2787; Fungi - 925; Plants - 1302; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01430.1

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G01070.1); Has 2489 Blast hits to 2481 proteins in 402 species: Archae - 14; Bacteria - 1085; Metazoa - 6; Fungi - 8; Plants - 1212; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink).
Link
InterPro Scan - TAIR