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15-2781-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11113772 [Map]; Strand: w
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 15-2781-1 - 5-prime edge 
    TTCATTCCCT GAAAAAAATA TTTTTGACTT CTCCAGGCTA ATCTTTTGAC 
    CAGAGGCTAT ACAAAATGTC TCCAGCACCT TCCGAATCAC TCTTATCTGC 
    ATTACTGAAG CCTCCGCAAA TAAAATTAGA TCGTCAGCAA AACAGATATG 
    AGATAACTTG GGACCGCCTT GAGACAAACT AATGGGCTTC CACTGTTTGT 
    TATCAATCGA TCGCTCAATC AAGTGACAAA GCCTCTCCAT ACATAGCACA 
    AACAAATACG GAGATAAGGG ATCACCCTGG CGGAGGCCCC GTAACGGCTT 
    GAAGGAGTCT GTTCTCTCTC CATTCCACAA CAAACTCATC TCCGGGCCCG 
    ACACACAGCA CATTATCCAT CTTACCCAAA CTTCGGGGAA CCCCGCAGAA 
    ATAAGTGTAT CCTCCAGATA ATCCCATNGG ATNANCANN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11113698 [Map]; Strand: w
      • AT4G20725.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 15-2781-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTC 
    TCACGTGATC TGAGCAAACT GATAAGTGAG GAGAGCGGGA TTAAAGCAAC 
    AAAAGACTTG GGTAAATATC TTGGGATGCC AGTACTTCAT AAACGCATCA 
    ATAAGGATAC TTTCAGTGAA CTTTTGGAGA AGGTCTCTTC CCGTTTGTCG 
    GGTTGGAAGG AGAGAACTTT GAGTTTTGCG GGACGGATGA CGCTTACCAA 
    AGCTGTATTA TCATCTATAC CGGTCCATAC AATGAGTTCT ATTGCGCTAC 
    CACAATCGAC TATTACTCGA TTGGACAAAG CT

AT4G20725.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.2e-31 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR