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Mutant Lines
15-2786-1

15-2786-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 4647555 [Map]; Strand: w
  - AT1G13580.3 - [+] show detail - LAG1 longevity assurance homolog 3
    Distance: -548; Region: promoter
  - AT1G13580.2 - [+] show detail - LAG1 longevity assurance homolog 3
    Distance: -702; Region: promoter
  - AT1G13580.1 - [+] show detail - LAG1 longevity assurance homolog 3
    Distance: -702; Region: promoter
  - AT1G13590.1 - [+] show detail - phytosulfokine 1 precursor
    Distance: -394; Region: promoter
Flanking Genome Sequence: 15-2786-1 - 5-prime edge
```
CATGCAGGCT CGAGTCATTA TGACATTAAC AATATCAAAT ACAAATAATA 
ATAGCCTATA TGTGTCATAT AGTATTTTGA AATACCGTTA TATGTAAGTA 
AGCT
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 4647439 [Map]; Strand: w
  - AT1G13580.3 - [+] show detail - LAG1 longevity assurance homolog 3
    Distance: -432; Region: promoter
  - AT1G13580.2 - [+] show detail - LAG1 longevity assurance homolog 3
    Distance: -586; Region: promoter
  - AT1G13580.1 - [+] show detail - LAG1 longevity assurance homolog 3
    Distance: -586; Region: promoter
  - AT1G13590.1 - [+] show detail - phytosulfokine 1 precursor
    Distance: -510; Region: promoter
Flanking Genome Sequence: 15-2786-1 - 3-prime edge
```
CCTGCATGGA CAATAGTATT NGAGAAGGTT CAAGTAANTA CAATCGCCGT 
TGGTTAATGG AGTAACTTAA TAATGTTAAG TTGTGTTGAG CCAAAGGAAA 
AACAAAAAAG AAAAGAAAAG AAAAGGTTTT AGTTGTATAA TCACCGACTC 
CTATATGGAG CATGTGTGGN CAAAAGCTAN CAACCCGGGN NGGGNANNAN 
ANTTNTTTTN NAGGAGGAAN AANTTTTTTT TANNCNAAAN AAGAGAAANN 
GNNGNNNNAG NNGGNNCNNN NNCCCNNNNN TNNNNNNGNA NNNNNACNNT 
ANAGNCNAGN NGNNAANNNN NCCCCACCNC CNC
```

AT1G13580.1

Model type: Protein coding
Short Description: LAG1 longevity assurance homolog 3
Computational Description: LAG1 longevity assurance homolog 3 (LAG13); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1); Has 1229 Blast hits to 1229 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 587; Fungi - 304; Plants - 168; Viruses - 3; Other Eukaryotes - 167 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G13580.2

Model type: Protein coding
Short Description: LAG1 longevity assurance homolog 3
Computational Description: LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G13580.3

Model type: Protein coding
Short Description: LAG1 longevity assurance homolog 3
Computational Description: LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1).
Link: InterPro Scan - TAIR

AT1G13590.1

Model type: Protein coding
Short Description: phytosulfokine 1 precursor
Curator Summary: Encodes a phytosulfokine-alpha (PSK) precursor, a unique plant peptide growth factor first described in Asparagus.
Computational Description: phytosulfokine 1 precursor (PSK1); FUNCTIONS IN: growth factor activity; INVOLVED IN: cell growth; LOCATED IN: extracellular matrix; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Phytosulfokine (InterPro:IPR009438); Has 98 Blast hits to 98 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR