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15-2795-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20008314 [Map]; Strand: w
      • AT1G53600.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 4898; Region: intergenic
      • AT1G53610.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 682; Region: intergenic
    Flanking Genome Sequence: 15-2795-1 - 5-prime edge 
    CTACTTGTGT TAATTTATAC TAAATTGTTG TTTGACTTTT GTATTTCAAT 
    TATAAGTACA TATTCATGGA AACATCCAAA GTTGCACANA TTAGTAGCAT 
    AANANTGGAN AGTCNNCAAC AATATGAGCA ANATATGGAT GTTCNANGAA 
    NATGTCCTTA TAGGGGAAGT NCAGNNGTNC NCGNNGGGTN AGGGGNAATA 
    ATNACANNAT CCNCGGATCA NAATTTTGTG GGGNGANTNC CAAANCCNNC 
    GAGACCGCCN AACCCGGGGG GGGGGGGGNT ATANCTTATT NTNATAAAAC 
    CCGGGGGGGG NNGGGGGNNA AAAAAAANNG NC

AT1G53600.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1); Has 77136 Blast hits to 22764 proteins in 1112 species: Archae - 15; Bacteria - 7068; Metazoa - 10011; Fungi - 1260; Plants - 54670; Viruses - 665; Other Eukaryotes - 3447 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G53610.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53620.1); Has 14 Blast hits to 14 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR