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15-2859-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17256402 [Map]; Strand: w
      • AT1G46624.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 15-2859-1 - 3-prime edge 
    TTAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCGT 
    GATTCTTGGG GTGAAAGGTG TTCTCCTTGT TGCTTCGATG ACCTTATCCA 
    CTTCGGGAGC CGAAGTAGTG GCTTGATGGA CTCTTGCATT CATGGCCCAG 
    ATTTGGTCTT GAAGGCTTTG GAGCTCCGAA TTGACTGCGT TTGGCTCTTG 
    TCGAGGATCG GAGATTGGGA TTCTGATGGA GGAATCAAGC GGAAACGGAG 
    TTCGAGCTAT TCCTCCATCT GAAATTGCGG CAAGTCCTGC TGGTGAAGAT 
    GAGGTGACAG GATTCTGAGT CGACGTCGCC CCGACTTCAA CCGGTGGTGG 
    CGGAGTCTGC TGGCCAGACG CTTCCTGGGA ATTTTGGACG CTCGGACTGA 
    CGGTGCCCTG GAAGTTGAGT CGCGTTCGAG CTCCAGTAAT CCGCGCAGTT 
    CCTGCAGAAA GTGAATCGAC TCGTTCTGCG TATGCGTTGT GAGCCGATCT 
    GATTTTGGAA TGATTAGCCG CTAGTGCTGC GAGTTGGCCG TTGCATTGCT 
    CTTGGAAGGT CACGAACTTG TCGGANAGAG ACNTCACGGC AAGCTGCTGT 
    CGGNCANNCT TCTNNGATAN CTGCTGAANC ANCTGCTTAA TGTCNNNNAN 
    GGTGGGGGCT NGGNCNCCNN ANCTNTNA

AT1G46624.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 4.3e-213 P-value blast match to GB:AAD11615 prpol (gypsy_Ty3-element) (Zea mays)
Link
InterPro Scan - TAIR