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15-2887-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 99612 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: -2957; Region: intergenic
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: -1037; Region: intergenic
    Flanking Genome Sequence: 15-2887-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA GAACATTGGA GAAGCATTTT TGGAATATAA 
    AAAGGAAGTG GGCGGTTTGT GATTAATTCT TAATTAACAA CTGACAGGGA 
    ACCAACTAAT TAAATTATCC ATCCTTTGTG AGAGATTGTT TAATATATAA 
    AGCAATTCAT AATTTGTGAA CTTGACCAAG ATTTTAGCAC GATCCTCGCT 
    TCGCTTCTTG TCTCCCTTGT GACGCATATC TAATATAAAC ATAAATTCAT 
    TATGTATCAT GTATGTATGA TCTTAGTTCT ATATTGACGC AAGAAAATTC 
    AAGTATTTGT TCACTTCGTG CTACCTATGA ATGAACATAA TTTAAAAAAA 
    AAAAATTTTN GTTNCTANCN ATCNTNTAAA ANAGTTTTAA GTTTTTCAAA 
    AANCNTANTT AAAATAAAAN TNGAAGGGGT AGGGGNGGGG TTNANNCATC 
    GATNTACCCA NCCAGGGANA NCCNCCTNGA CTNTTTTNGA CCNAATTNTT 
    NNNCCACNCN TTCCATTTTA NNTNATAAAA TNNGAAACCA CTTACCATNT 
    TTTNNTNANA TAGCTAGCAA ACNANNGTTT TANTTNNGGG GGGGNGGNAC 
    CCCNATTCTA NAGGGAANCC NGGGAAAAAT ANCAGGCGAA GNGNCCTNNN 
    NNNCCCCCGG NGGTTNATTG AAAAANCCTT TTTTTTTAAA ANAAACNAAC 
    CCCACCCTAT TTTTTTTGGC TTTAAAAATT AAAATT

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR