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15-2890-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5747033 [Map]; Strand: w
      • AT5G17430.1 - [+] show detail - Integrase-type DNA-binding superfamily protein
        Distance: -1465; Region: intergenic
      • AT5G17440.1 - [+] show detail - LUC7 related protein
        Distance: -2729; Region: intergenic
    Flanking Genome Sequence: 15-2890-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    NNTCNNANTT TNTTCCTNGG TTANGCAACG CGCCCCACNT ACAGACTCCC 
    CCTCCGGTGC GCAGGATCAN CAANCCGGGN CAGANNACCA NCCTNTGCCC 
    TNNAAAGAAA ATTTTATTCA CATTACTTTA GGTTTTGATC CCGGGGCGGG 
    ACGATNTATA ACAAATAAAC AAACTATTTA TATATCATTC ACGAATGACT 
    TCATTGCATG CGTTTAAATT CTAAATACGA AAGAACGGCT GAGGTTTTAT 
    AATCAAAGTT TTGTGTAAAA AACAGCTNCT TCAAAACCNT ATGTATCATA 
    TTATGCTATG TTTCTTGTAA ATACAAAAAC TAAATTTTTT GGGGGCCGTA 
    ATTTATTGAA NTGANAAACA CCTGNAGATT GAGATTCCAT CTTGAAAATA 
    AAAGGGANCN CCCTGNAAAT GAAGATTTCT ANAACTGANA NAGCGTNTGA 
    CCTNNANTAN GATANTGAAT AAATCTGNAT GTANGGNGGA NAATGAGAAA 
    AGGAGAGAAA ANTGGTTTAA AACAACCAAN AGAAAGAAAA GACAGNNNTT 
    GTGAGCTAAA AGCNTNATGG GNTGAGTNNN NANCATGTTT GGNCANGNAT 
    TNAAGGCNNA NNNGCTANTG NANAATNGTT NTANACTNNC CCCNANAAAA 
    AACGTTTAAN AATTNCCANT TATTTTGTNA NTTTAAAANA CNNTTTNTTC 
    ACTTATANNT GNNCNTATNN CNGNNANANA ANTGTACGNA NNNNAGNNG

AT5G17430.1

Model type
Protein coding
Short Description
Integrase-type DNA-binding superfamily protein
Curator Summary
Encodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium.
Computational Description
BABY BOOM (BBM); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G51190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G17440.1

Model type
Protein coding
Short Description
LUC7 related protein
Computational Description
LUC7 related protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR