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15-2971-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 12052922 [Map]; Strand: c
      • AT1G33240.1 - [+] show detail - GT-2-like 1
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-2971-1 - 3-prime edge 
    ACGGTGGAGG CGGTTGAGAT GACAAAGAAG GAGGTAACTG AATGGTATGG 
    CCAGTAATTT TCTGAATCAA TGAAATGATT GCGGCGTCAC GAGAAGCAGA 
    GGCGGCTCGT TCTTGAGACA TGACCTCGTG TTCTCGAGCT AACCGAGCCA 
    TTTCTTGACG TTTCCAAGCT

AT1G33240.1

Model type
Protein coding
Short Description
GT-2-like 1
Curator Summary
Encodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone. Regulates ploidy-dependent cell growth in trichome.
Computational Description
GT-2-like 1 (GTL1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 6156 Blast hits to 4698 proteins in 415 species: Archae - 8; Bacteria - 243; Metazoa - 2333; Fungi - 696; Plants - 1321; Viruses - 126; Other Eukaryotes - 1429 (source: NCBI BLink).
Link
InterPro Scan - TAIR