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15-2983-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19351170 [Map]; Strand: c
      • AT2G47130.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -631; Region: promoter
      • AT2G47140.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-2983-1 - 3-prime edge
    CCACGCANGC TTGGGNNCAT CNNGNGACNA TTAACANACT NGCNGTGNNG 
    NGACACNAAN TGGNGCAACG NCCGGTGACA TCNTATGCCA TATGAATNNN
    AATCCACCGG CAAGCCGATT NGNTCAGCAC CNATCAGCCC ATGCNTTCGA
    CGTCAGTGTA CCTATATTAT TAGTAAGCAA TTCATTCTAT TTTGAATTTT
    AACGATAAAA AATTATTGTC AATAAATCGT GACAACATGA TCACTTTGNT
    ATTCTTTTAA TTATAATACT CCGTTGCAGC GATCCACGTA TTTATTATTA
    CATGGTTTTG AAAACGAAAT TAGTTAANTG CACTTTTGGT TTGTCTAAAG
    AATTTANAAG TCTTTGTTGT GAATATTAGT TTNNACCCGG GTGGTGCCAG
    NGCCAGCGAN CNNAGCCGCN ANNCTANGTG NTGCAAACAG ANGGANCCNA
    NGANGCCNAT TCTTAACCNA TGGNNCGTGC AGCNTGCTCT NANGAATGCN
    AGGGTGNNCC GCNGAAGGGT TAATNGGNNA TNNGNATNGG GCAAAACTTN
    NTTNNTGGTN TANGNNCGNG GNAANNCNNA TNAAANGGGN ANNTTATTNN
    NANCGNGGNG TTATCNAANN CNCAGACCGG NGAGCNCTTN CNNANNCGGG
    NANTGTTAAT NNNNNCNGTG ANTCTTNNNG TNTTGNNNAA ANAGANTNNC
    TGCGCNNNGA NTNNNGTAGA CCCNANNATN NNAGNANGNG GCNCNNNATN
    GGNNGANNGG ACNTANGCNA AGNNCGTATA GNCNNGGNNN GTNGCAG
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19351061 [Map]; Strand: c
      • AT2G47130.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -522; Region: promoter
      • AT2G47140.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-2983-1 - 5-prime edge
    CGTGGTGGAG CAGAACACGT CAGCTTCGGC GAATCTAAAG GGCATTGTAT 
    TGAAAGCTCG TCACGTGGCA GAAGCTGCTC TGTTTTTAGC GTCCGATGAG
    TCGGCTTACG TTAGCNGGAC AGAACCTGGC TGTTGACNGG TGGTTACTCG
    GTGGTGAAGC CGTAGCTATA ACAACTTGGC CACAAAGATC CCATGATGGA
    ATATTGGAAT TTTGTTTTTT TGGTCAAAAG TTGACTTGAC TTAATTGTTG
    TAGAGGCATG GGGATTGAGA AGTTTCTGAG GTTGCAAATT TCCTTGAAAT
    GTGGATGTTG TATTTTTATA TGGTAACATT CATTATCCAA CATATTGCAC
    ATCTCGAGGA TAATTTATTT AAACAAATAC TACAAGCT

AT2G47130.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G29260.1); Has 122340 Blast hits to 122121 proteins in 3572 species: Archae - 980; Bacteria - 79164; Metazoa - 5393; Fungi - 6725; Plants - 2704; Viruses - 5; Other Eukaryotes - 27369 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47140.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink).
Link
InterPro Scan - TAIR