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15-3014-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14311016 [Map]; Strand: c
      • AT4G29035.1 - [+] show detail - Plant self-incompatibility protein S1 family
        Distance: 246; Region: intergenic
      • AT4G29040.1 - [+] show detail - regulatory particle AAA-ATPase 2A
        Distance: -1287; Region: intergenic
    Flanking Genome Sequence: 15-3014-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC TTTATATATC AATCTAAAAC CTCTATGATG 
    AGGTGGATTA TAAAGCAGCA AACCATTGTC TTGAACAGTC CAAAAACAAT 
    TGAATCCAAG ACACGATCGA AGAAAACAAA AATCTTCGAT GACAAATACA 
    GAAAAATAAG AGAGAATTTA TGACAAAAGT AAAGTATTAC TTCAGTTTTT 
    TTTGCCTGCC AAAATTAACA GATACATATA ATAGTTAAAA AAATTACCAA 
    CAAATCAAAA ATATGTTTTC ACCATCCAGA TTCCCATTTC TCCGACAGTA 
    CATCTTCACC GATTGCAGAA TT

AT4G29035.1

Model type
Protein coding
Short Description
Plant self-incompatibility protein S1 family
Computational Description
Plant self-incompatibility protein S1 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: S-protein homologue 1 (TAIR:AT4G16295.1); Has 254 Blast hits to 249 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G29040.1

Model type
Protein coding
Short Description
regulatory particle AAA-ATPase 2A
Curator Summary
26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA,
Computational Description
regulatory particle AAA-ATPase 2A (RPT2a); FUNCTIONS IN: ATPase activity; INVOLVED IN: in 17 processes; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G20140.1); Has 31112 Blast hits to 28760 proteins in 3112 species: Archae - 1431; Bacteria - 10308; Metazoa - 4877; Fungi - 3744; Plants - 3214; Viruses - 41; Other Eukaryotes - 7497 (source: NCBI BLink).
Link
InterPro Scan - TAIR